Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq59 239 5e-58
seq38 111 2e-19
>seq59
Length=151500
Score = 239 bits (264), Expect = 5e-58
Identities = 909/1401 (65%), Gaps = 47/1401 (3%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACA---TTGATTCT 104278
|| ||| ||||| | ||||| || || ||||||| ||||| |||| |||| |
Sbjct 87697 CCTCAGCACATGATTATGCGTGTAGCTGTCGGTATC--TGGGGT-GACAATGTTGAGCGT 87641
Query 104279 GTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCC 104336
|| |||| || ||| || ||||| |||| | | ||| ||| ||| | || ||||
Sbjct 87640 GTTCTGGAAACTTACAACCTCATGTCGAGCAAGTTCT--TCACTCATGCATCTCCTACCC 87583
Query 104337 TCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGG 104396
||||||| |||||||| || ||||| | || ||||||| | | | || ||||
Sbjct 87582 TCTTCAACGCTGGTACTCCCCAGCCCCAGCTTTCTTCTTGCTTCTTGGTAGACATGAAGG 87523
Query 104397 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTG 104454
||||| ||| | |||||||||| || || | | | | ||||| | ||||| |||
Sbjct 87522 AGGACAGTATCGAAGGTATCTATGACACCCTCAAG-ACT-TGCGCTATGATCTCCAAGAT 87465
Query 104455 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 104514
||| || || ||||| | || | || | | | || | | ||| ||| ||
Sbjct 87464 GGCGGGTGGCATTGGTCTCAACGTACACCGTATCCGTGCTACTGGTTCTTACATTGCTGG 87405
Query 104515 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574
|| || ||| || | |||||| |||| ||| | || || || ||| || || ||
Sbjct 87404 CACCAACGGTACCTCGAACGGTATTGTTCCCATGTTGCGTGTCTTCAACAATACTGCTCG 87345
Query 104575 CTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCC 104628
|| || |||| | ||| ||||| || || | || | || || |||||
Sbjct 87344 TTACGTCGATCAGGGTGGTAACAAGCGTCCC---GGTGCTTTTGCCATTTACCTGGAGCC 87288
Query 104629 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGC 104688
|||||||| ||| | | ||||||||||| | || ||||| ||| | ||||||
Sbjct 87287 GTGGCACGCTGATGTGTTCGAGTTCCTTGATCTCCGGAAGAACCACGGTAAGGAGGAGAT 87228
Query 104689 GCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747
| |||| |||||| | ||| || | |||||||| ||| | ||||||||| | ||||
Sbjct 87227 TC-GTGCTCGCGATTTGTTCCTTGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTGTTG 87169
Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCC 104806
|| ||| ||||| ||| ||||| | || || || || ||||| || | || |||
Sbjct 87168 AGAAGAACGGCAACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTGGCTGACTGCT 87109
Query 104807 GTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTC--GGGCGACTG 104864
| || || || ||||| || || || || |||||||| | || || | || || ||
Sbjct 87108 AT-GGCGATGAATTTGAGGCTCTCTATACCAAGTACGAACAGGAGGGACGTGGCCGTCT- 87051
Query 104865 CGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGT 104923
||| | || | || | ||||| | ||||| | || |||| || |||||||||
Sbjct 87050 -GACCAT-TAAGGCCCAGAAGCTGTGGTATGCTATCTTGGAGGCTCAGACTGAGACTGGT 86993
Query 104924 ACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGT 104983
| || | |||||| ||||| || ||| |||| |||||||| || ||||| ||||
Sbjct 86992 AACCCTTTCATGCTGTACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAACCTGGGA 86933
Query 104984 GTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACG 105043
|| |||||||| || || || || ||| | || | | ||||||
Sbjct 86932 ACTATTCGCAGTTCCAACCTTTGCACTGAGATCATCGAGTACTGCGCTCCCGATGAGGTT 86873
Query 105044 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGAC 105102
|| ||||| ||||| || || | ||||| || | ||| || | || | | || |
Sbjct 86872 GCCGTGTGCAACCTGGCTTCTCTTGCTCTTCCTGCCTTTGTTGACTACA-ACAACAACTC 86814
Query 105103 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGT 105162
| || | | || || ||||| || || || || ||| | ||| | |
Sbjct 86813 CTACGACTTCCAGAAGCTGCACGATGTCACCAAGGTCGTTGTTCGCAACTTGAACCGCAT 86754
Query 105163 TATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACCG 105219
||||||| || ||||||||| ||| || ||||| || ||| | |||||
Sbjct 86753 TATTGATGTGAACCACTACCCCGTTATCGAG---GCCCGTAACAGCAACATGCGCCACCG 86697
Query 105220 TCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATT 105279
|| || ||| | |||||||||||||| || |||| ||| | |||| | ||
Sbjct 86696 CCCCATCGGTGTTGGTGTTCAGGGTCTGGCTGATGCCTTCCTGGCCCTTCGCATGCCTTT 86637
Query 105280 TGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGC 105339
||| || | || || | |||| || || ||||||||||| || ||||| ||
Sbjct 86636 TGAGTCTGCTGAGGCCCGTCAGCTCAACAAGCAGATCTTTGAGACCATTTACCACGCTGC 86577
Query 105340 TCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399
|| |||||| | || | || |||| ||||| || |||| ||||||||
Sbjct 86576 CCTCGAGGCGTCGTGCGATATTGCTATTCTTGAAGGTCCCTACTCGACCTACGAGGGTTC 86517
Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCAC-- 105457
||| | || || || | ||||| || || ||||||| | || | || || | ||
Sbjct 86516 TCCTGTCTCTCAGGGTATCCTTCAGTTCGACATGTGGG-ATGTTACCCCCAG--TGACCT 86460
Query 105458 -TACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCT 105516
| |||||| | || | ||||| | |||||| || | ||| |||| ||| || ||
Sbjct 86459 GTGGGACTGGAACTCTTTGAAGGACCAGATCAAGCAGCACGGTGTTCGCAACTCCCTTCT 86400
Query 105517 CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 105576
|||| || ||||| |||||||| || | || || ||||||| || || ||||| ||
Sbjct 86399 TTTGGCCCCTATGCCCACAGCCTCGACGTCCCAGATTCTGGGTAACAACGAGTGCTTCGA 86340
Query 105577 ACCCTACACGACGAACATCTA 105597
|| ||||| | ||||| ||
Sbjct 86339 GCCTTACACTTCCAACATTTA 86319
>seq38
Length=199572
Score = 111 bits (122), Expect = 2e-19
Identities = 150/206 (73%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 94753 AAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTCGCGTTCCTTTGCTGAGCGA 94809
|| || || ||||| |||||||| || |||| ||||| ||||||| ||||
Sbjct 76515 AAGGCCGACTGGGCCCTGAAGTGGATTACCGACAAGGAGTCGA---CCTTTGCCCAGCGT 76571
Query 94810 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 94869
|| | || ||||| |||||||||||||||||||||||| |||| | |||| | |
Sbjct 76572 CTGGTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCTATCTTT 76631
Query 94870 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 94929
||||| ||||| ||| | ||||| ||| | |||||| |||||||| ||||| |||
Sbjct 76632 TGGCTGCGCAAGCGTGGTATGATGCCCGGTTTGACCTTCTCAAACGAGCTGATCTCCCGT 76691
Query 94930 GACGAGGGACTCCACCAAGAGTTTGC 94955
|| ||||| || ||| || |||||
Sbjct 76692 GATGAGGGTCTTCACACCGACTTTGC 76717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583258138872600
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