Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq59 176 5e-39
seq17 143 3e-29
seq38 102 9e-17
>seq59
Length=151500
Score = 176 bits (194), Expect = 5e-39
Identities = 384/569 (67%), Gaps = 12/569 (2%)
Strand=Plus/Minus
Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254
||||| || || | |||||| |||||| | |||||| | || || ||| ||
Sbjct 87682 ATGCGTGTAGCTGTCGGTATCTGGGGTGACAATGTTGAGCGTGTTCTGGAAACTTACAAC 87623
Query 53255 TTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311
| ||| ||| |||| ||| || || || | || ||||| ||||||||||||||
Sbjct 87622 CTCATGTCGAGC---AAGTTCTTCACTCATGCATCTCCTACCCTCTTCAACGCTGGTACT 87566
Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371
|| || ||| | || |||||| |||| | |||||||| ||| ||||| ||
Sbjct 87565 CCCCAGCCCCAGCTTTCTTCTTGCTTCTTGGTAGACATGAAGGAGGACAGTATCGAAGGT 87506
Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431
||||| || || |||||| || || ||||||||| | ||||||| || ||| ||
Sbjct 87505 ATCTATGACACCCTCAAGACTTGCGCTATGATCTCCAAGATGGCGGGTGGCATTGGTCTC 87446
Query 53432 CACTGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489
|| | | ||| |||||| | || | || || || ||||| | |
Sbjct 87445 AACG--TACACCGTATCCGTGCTACTGGTTCTTACATTGCTGGCACCAACGGTACCTCGA 87388
Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549
| || || || || ||| | || ||||||||||| || || || |||||| | |||||||
Sbjct 87387 ACGGTATTGTTCCCATGTTGCGTGTCTTCAACAATACTGCTCGTTACGTCGATCAGGGTG 87328
Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609
|| ||||| || | || ||||| ||||| |||||||||||||| || | | |
Sbjct 87327 GTAACAAGCGTCCCGGTGCTTTTGCCATTTACCTGGAGCCGTGGCACGCTGATGTGTTCG 87268
Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTT 53668
|||| || || || || ||| || ||| | || ||||| || ||| || || ||||
Sbjct 87267 AGTTCCTTGATCTCCGGAAGAACCACGGTAAGGAGGAGATTCG-TGCTCGCGATTTGTTC 87209
Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728
|| |||||||||| || | |||||| | || |||||| ||| | |||
Sbjct 87208 CTTGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTGTTGAGAAGAACGGCAACTGGACT 87149
Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCT 53757
|| |||||||| ||||||||||| |||||
Sbjct 87148 CTCATGTGCCCCAACGAGTGCCCTGGCCT 87120
Score = 109 bits (120), Expect = 6e-19
Identities = 300/452 (66%), Gaps = 17/452 (4%)
Strand=Plus/Minus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
||||||||||| || |||| || ||||| || || |||||| | ||||| |||| |||
Sbjct 86413 CGCAACTCCCTTCTTTTGGCCCCTATGCCCACAGCCTCGACGTCCCAGATTCTGGGTAAC 86354
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
|||||| |||||||| ||||| ||||||| |||| |||||| | || ||||||
Sbjct 86353 AACGAGTGCTTCGAGCCTTACACTTCCAACATTTACCAGCGCCGTGTGTTGGCTGGTGAG 86294
Query 55604 TTTGTCATGATCAACAAGCA----CCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAA 55659
|| | ||||| | | |||| |||||| | | ||||
Sbjct 86293 TTCCAGGTTGTCAACCCGTGGTTGCTTCGT----GACCTGGTTGACCTTGGTCTGTGGTC 86238
Query 55660 CCCGCAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTCCAGAA--TCTGGAG- 55714
| | || |||| || || | | || || || || ||||||| || ||
Sbjct 86237 CGACAACATGAAGAACCGTATCATTTCCG--ACAACGGTTCTATCCAGAACATCCCCAGC 86180
Query 55715 ATTCCT-CTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCT 55773
|||||| ||| ||||| | ||| |||||| ||||||||| | ||| | | |
Sbjct 86179 ATTCCTGCTGACA-TCAAGTCTCTGTACAAGACGGTTTGGGAGATTTCTCAGCGCACTGT 86121
Query 55774 GATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTT 55833
|| | ||| || ||||||||||| | || || ||||| ||||| |||||||
Sbjct 86120 TGTTCAAATGGCGGCCGATCGTGGTGCCTTTATTGATCAGTCTCAGTCGTTGAACATTCA 86061
Query 55834 CATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGG 55893
|||| || | ||| | ||| ||| | | | |||||||| ||| |||||| ||
Sbjct 86060 CATGAAGGACCCTACCATGGGTAAGATCACCAGCATGCACTTCGCCGGTTGGAAGCTCGG 86001
Query 55894 ACTCAAGACGGGTATGTACTATCTGCGGACCC 55925
|||||||||||||||||||| ||||| ||||
Sbjct 86000 TCTCAAGACGGGTATGTACTACCTGCGTACCC 85969
>seq17
Length=280677
Score = 143 bits (158), Expect = 3e-29
Identities = 198/275 (72%), Gaps = 4/275 (1%)
Strand=Plus/Plus
Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358
|| |||||| ||| ||||||| |||||||| |||||||||||||| | |||
Sbjct 145816 AGACGAGTGTGAATATAACGAGCCGAGGCAGCATCTGAACCACCAGCAAGACGAGAACCA 145875
Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418
|| | ||||| ||||||||| || | |||||| | || ||||||| ||||| |
Sbjct 145876 AAGTTACCACTGGGCTCCAAGCAATTGACGTTGTTAGAACCGACAAAGTCCTGAGCAAGA 145935
Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478
| |||||| || ||| || ||||| || || |||| |||||| ||| ||
Sbjct 145936 CCAATAATCGTCTGCTGCAGGGAAGCTTCACCGTGTTGGTACGACGTCTGACCCGAAACA 145995
Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536
|| || |||| || | | |||||||| || |||| || ||| |||||| |||||||
Sbjct 145996 TAACCAGCCAACTCAACAACCTTCATATCCTTGAC--CACGTTACTCTTGAAACAGGCAT 146053
Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATCC 117571
| || ||||||||||||| |||||||| ||||||
Sbjct 146054 ACATAACCTTGCGCTGACCAGGCTTCAGTCCATCC 146088
Score = 123 bits (136), Expect = 3e-23
Identities = 231/332 (70%), Gaps = 8/332 (2%)
Strand=Plus/Plus
Query 152782 CCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAGACGACCGTAGCGC 152841
|||||||| ||||| || || ||||| |||| ||||||||||||| |||| || ||
Sbjct 146581 CCCTTGATATGCGAACCATCGTGATCCTGATCGGCCATGATCATCAGATGACCATAACGA 146640
Query 152842 AGGTCACGTAGTGACCCGTAGACCTTTCCATGT--TGAAGCCCGAGGATCTTTTTGAGGT 152899
|| | | | || | |||| | | || ||| | ||| || | || || ||||| |
Sbjct 146641 AGCCC-CTTGGT-ATCCGTGTAAACTGCCTTGTGCTTAAGACCCAAGAACTGTTTGATAT 146698
Query 152900 TGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCGAACATTGCGCGGCT 152959
| || ||||| || | ||| | ||| | || | ||||| ||||| ||| || ||
Sbjct 146699 TTTGAATTTCCTGGTTCTTGGTAATCTGGTCCAAAGAAGCATCACGAACGTTGAGCATCT 146758
Query 152960 TTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGG--CCTACAACGCTCAGACCGGCAAT 153017
| || |||||||| || || || || ||| | || || | | || | |||| ||||
Sbjct 146759 TACCACGGAGTGGGAAAACACC-AATGCGGTCAGGATCCAAAATGGCAC-GACCAGCAAC 146816
Query 153018 AGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAGTCGTGAGACCGATG 153077
|| | | || ||||||||||| ||||| | ||| || ||||| |||||| ||| |
Sbjct 146817 GGCCAAAGACTTGGCCGAGTCACCTTCGGTCAGAATCAGAGTACACTCGTGACCACGACG 146876
Query 153078 AGTACCGGCCCAGTTGGCGTCGTCAAGCTTGG 153109
||||| ||| ||||||| || |||||||||
Sbjct 146877 GGTACCAGCCAAGTTGGCATCTACAAGCTTGG 146908
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 152049 GGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTT 152108
||| ||||| ||||| || || || | ||||| | ||| |||||| | | ||
Sbjct 145842 GGCAGCATCTGAACCACCAGCAAGACGAGAACCAAAGTTACCACTGGGCTCCAAGCAATT 145901
Query 152109 GAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGC 152168
|| |||||| | || || || | |||||| | | | |||||| |||||| ||
Sbjct 145902 GACGTTGTTAGAACCGACAAAGTCCTGAGCAAGACCAATAATCGTCTGCTGCAGGGAAGC 145961
Query 152169 TTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCAT 152228
||||||||| || |||| |||||| ||| | || || ||||||| | ||||||||
Sbjct 145962 TTCACCGTGTTGGTACGACGTCTGACCCGAAACATAACCAGCCAACTCAACAACCTTCAT 146021
Query 152229 GTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTG 152276
||| | || ||| |||||| |||||| || || |||||||||||
Sbjct 146022 ATCCTTGACCACGTTACTCTTGAAACAGGCATACATAACCTTGCGCTG 146069
>seq38
Length=199572
Score = 102 bits (112), Expect = 9e-17
Identities = 393/607 (65%), Gaps = 24/607 (4%)
Strand=Plus/Minus
Query 74728 TCAGGTGAGAGTAAAGC-GTCACGGCAAACTCCTGATGCGAG--CCTTCATCTCTGCTTA 74784
||| ||||||| |||| | || |||||| || | || || || ||||| | | |
Sbjct 76740 TCAAGTGAGAGAAAAGAAGGCA-GGCAAAGTC--GGTGTGAAGACCCTCATCACGGGAGA 76684
Query 74785 TCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGAT-- 74842
||| || || || || | | || ||||| | |||||||| || |||||||||
Sbjct 76683 TCAGCTCGTTTGAGAAGGTCAAACCGGGCATCATACCACGCTTGCGCAGCCAAAAGATAG 76624
Query 74843 -GGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTT 74901
|||| |||| |||| ||||||||| || || || |||||||| || || || |
Sbjct 76623 AGGCA---AAGGCACCAGAGAAGAAGATACCCTCAACGGCAGCAAAGGCAACCAGACGCT 76567
Query 74902 GCGCGAACGGTGCATC---GGAAGTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGA 74958
| || || | | || | || ||||| || | ||||| || || || || ||
Sbjct 76566 GGGCAAAGGTCGACTCCTTGTCGGTAATCCACTTCAGGGCCCAGTCGGCCTTGCGGCGGA 76507
Query 74959 CCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCG--GGATCCTTGAC 75016
||| | ||||| || || | ||| ||| | | | | || | || |||||||
Sbjct 76506 TGCAAGGAATGGTATCAATGGCGTTGAACAGG--TACGTGCGCTGAGCAGGCTCCTTGAT 76449
Query 75017 GAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTA 75076
| | || |||| || |||||||||||||| ||||| ||| | | |||| |
Sbjct 76448 GTAGGTATCGATCAGGAGGGAGTACGTCTCCGAGTGAATGTTCTCCATCATAATCTGGAA 76389
Query 75077 CGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAATTCATGTCGATATT 75136
|||| || | || ||||| | |||||| || || || ||| | | | | ||
Sbjct 76388 ACCGTAAAAGCAGCGGGCCTCGGGAATCTGCACCTCGGCAGAGAAACGCTCGACCAAGTT 76329
Query 75137 CTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCG 75196
||| |||| || ||||| ||||| ||||| || || || || ||| ||| |
Sbjct 76328 CTCGTTGACAATACCGTCAGAGGCAGCGAAGAAGGCAAGGACGTGAGAGATGAAGAACTG 76269
Query 75197 CTCATC----GTCAGTGAGTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCT 75252
||||| |||| || | |||| ||| || | || ||| | ||| ||||||||||
Sbjct 76268 TTCATCCTTGGTCA-TGCGGTTGTTCCAGTCGTGAAGATCCTTGGACAAGTCAATCTCCT 76210
Query 75253 CGACCGTCCAGAAACTCCCAATCGCCTTTTTGTACAAAGACCACAAGTCAGGGTAATTGA 75312
|| | ||||||||| | ||||| ||||||| ||| | ||| |||| ||||
Sbjct 76209 CGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCAGATCTCATGGTACTTGA 76150
Query 75313 TTGGAAA 75319
| || ||
Sbjct 76149 TGGGGAA 76143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547213503327000
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