Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq24 84.2 2e-11
>seq24
Length=264051
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
|||| || || ||| ||| || || || || || || | || || || |||| ||
Sbjct 250550 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCCTCC 250491
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| || || ||||| ||||||||||||||||||| ||| | | ||| |||||| |
Sbjct 250490 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGG 250431
Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
|| || || | ||| | | | ||||| ||||| || || | ||||| | ||
Sbjct 250430 ATCTTGCTCTTCA-CGTTGTCAATGGTATCAGAAGACTCGACTTCAAGAGTGATGGTCTT 250372
Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||| || || || || || ||||| |||||
Sbjct 250371 TCCAGTGAGAGTCTTCACGAAGATCTGCAT 250342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429543689193245
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |