Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq38 138 1e-27 >seq38 Length=199572 Score = 138 bits (152), Expect = 1e-27 Identities = 561/875 (64%), Gaps = 17/875 (2%) Strand=Plus/Minus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| || ||||| || || ||||| |||||||| || || ||||| | | Sbjct 77020 ACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGG 76961 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGA 4367 || || ||||||||||| || || || |||| || ||||| || || ||| Sbjct 76960 GAGATGTTTTCCATAAAGTCGAAGGGGTTAGAAGCCTTGTACACCTTGTCGTTGCCGAGA 76901 Query 4368 GCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATT 4427 || || || | ||||| || || || || || || ||||||| || ||| || Sbjct 76900 GCCACCAGAAGACGGTCGGCGACGAACTCGATGTAAGTCTTCATGAGGTCAGCGTTCATA 76841 Query 4428 CCAATTA-ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTC 4486 |||| | | | || || || || | || | ||||| | || ||| ||||| || Sbjct 76840 CCAAGAAGAGCGCAG-GGAAGAGCCTCAGTAAGGAACTCCTTCTCGATAACAACGGCATC 76782 Query 4487 TGTGATTATATCTTTTATTTTAT-CTT--TAGATGGTTTATTTACTAAGTATCCAAACAA 4543 ||||| || || | || | ||| ||| | || || | ||| || | Sbjct 76781 AGTGATAATGTCCTGGATCAACTGCTTGCTAGGGCGGTTGTTCA---AGTGAGAGAAAAG 76725 Query 4544 TAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGT 4603 | || ||||| || || | ||| || || | | ||||| ||||| || || || Sbjct 76724 AAGGCAGGCAAAGTCGGTGTGAAGACCCTCATCACGGGAGATCAGCTCGTTTGAGAAGGT 76665 Query 4604 TAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAA 4663 || |||||||| | ||| | ||| |||||||| |||| |||||| | ||||| || Sbjct 76664 CAAACCGGGCATCATACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCACCAGAGAA 76605 Query 4664 GAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAA---CGAGCTGGCTTT 4720 ||| || || || ||||| ||||| || || | || | || ||| || | || Sbjct 76604 GAAGATACCCTCAACGGCAGCAAAGGCAACCAGACGCTGGGCAAAGGTCGA-CT--CCTT 76548 Query 4721 GTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATAT 4780 ||| ||||||| || | ||||||| || || | ||| ||||| || | || Sbjct 76547 GTCGGTAATCCACTTCAGGGCCCAGTCGGCCTTGCGGCGGATGCAAGGAATGGTATCAAT 76488 Query 4781 AGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840 ||||| || | | | | | || || | || || || || || || ||| Sbjct 76487 GGCGTTGAACAGGTACGTGCGCTGAGCAGGCTCCTTGATGTAGGTATCGATCAGGAGGGA 76428 Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900 ||| | || || || || || || || |||||| || ||||||||||| | || || Sbjct 76427 GTACGTCTCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAAAAGCAGCGGGCCTC 76368 Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960 | | || || ||| | | || | || || ||||| ||||| || ||||||||| Sbjct 76367 GGGAATCTGCACCTCGGCAGAGAAACGCTCGACCAAGTTCTCGTTGACAATACCGTCAGA 76308 Query 4961 GGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTC---AGGCTTAAGTTT 5017 ||| || || || || | || ||||| || ||| ||||||| || | | | | || Sbjct 76307 GGCAGCGAAGAAGGCAAGGACGTGAGAGATGAAGAACTGTTCATCCTTGGTCATGCGGTT 76248 Query 5018 TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTC 5077 ||||||| | | | ||| || | || |||| || || ||||||| || || || || Sbjct 76247 GTTCCAGTCGTGAAGATCCTTGGACAAGTCAATCTCCTCGGCAGTCCAGAAAGAGGCCTC 76188 Query 5078 CGCTTTTTTGTACATAGACCAAATATCAGGATACT 5112 || || |||||||| ||| || ||| | |||| Sbjct 76187 GGCCTTCTTGTACATTTGCCAGATCTCATGGTACT 76153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427047700296545