Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq38 138 1e-27
>seq38
Length=199572
Score = 138 bits (152), Expect = 1e-27
Identities = 561/875 (64%), Gaps = 17/875 (2%)
Strand=Plus/Minus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
|||||| || ||||| || || ||||| |||||||| || || ||||| | |
Sbjct 77020 ACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGG 76961
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGA 4367
|| || ||||||||||| || || || |||| || ||||| || || |||
Sbjct 76960 GAGATGTTTTCCATAAAGTCGAAGGGGTTAGAAGCCTTGTACACCTTGTCGTTGCCGAGA 76901
Query 4368 GCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATT 4427
|| || || | ||||| || || || || || || ||||||| || ||| ||
Sbjct 76900 GCCACCAGAAGACGGTCGGCGACGAACTCGATGTAAGTCTTCATGAGGTCAGCGTTCATA 76841
Query 4428 CCAATTA-ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTC 4486
|||| | | | || || || || | || | ||||| | || ||| ||||| ||
Sbjct 76840 CCAAGAAGAGCGCAG-GGAAGAGCCTCAGTAAGGAACTCCTTCTCGATAACAACGGCATC 76782
Query 4487 TGTGATTATATCTTTTATTTTAT-CTT--TAGATGGTTTATTTACTAAGTATCCAAACAA 4543
||||| || || | || | ||| ||| | || || | ||| || |
Sbjct 76781 AGTGATAATGTCCTGGATCAACTGCTTGCTAGGGCGGTTGTTCA---AGTGAGAGAAAAG 76725
Query 4544 TAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGT 4603
| || ||||| || || | ||| || || | | ||||| ||||| || || ||
Sbjct 76724 AAGGCAGGCAAAGTCGGTGTGAAGACCCTCATCACGGGAGATCAGCTCGTTTGAGAAGGT 76665
Query 4604 TAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAA 4663
|| |||||||| | ||| | ||| |||||||| |||| |||||| | ||||| ||
Sbjct 76664 CAAACCGGGCATCATACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCACCAGAGAA 76605
Query 4664 GAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAA---CGAGCTGGCTTT 4720
||| || || || ||||| ||||| || || | || | || ||| || | ||
Sbjct 76604 GAAGATACCCTCAACGGCAGCAAAGGCAACCAGACGCTGGGCAAAGGTCGA-CT--CCTT 76548
Query 4721 GTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATAT 4780
||| ||||||| || | ||||||| || || | ||| ||||| || | ||
Sbjct 76547 GTCGGTAATCCACTTCAGGGCCCAGTCGGCCTTGCGGCGGATGCAAGGAATGGTATCAAT 76488
Query 4781 AGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840
||||| || | | | | | || || | || || || || || || |||
Sbjct 76487 GGCGTTGAACAGGTACGTGCGCTGAGCAGGCTCCTTGATGTAGGTATCGATCAGGAGGGA 76428
Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900
||| | || || || || || || || |||||| || ||||||||||| | || ||
Sbjct 76427 GTACGTCTCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAAAAGCAGCGGGCCTC 76368
Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960
| | || || ||| | | || | || || ||||| ||||| || |||||||||
Sbjct 76367 GGGAATCTGCACCTCGGCAGAGAAACGCTCGACCAAGTTCTCGTTGACAATACCGTCAGA 76308
Query 4961 GGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTC---AGGCTTAAGTTT 5017
||| || || || || | || ||||| || ||| ||||||| || | | | | ||
Sbjct 76307 GGCAGCGAAGAAGGCAAGGACGTGAGAGATGAAGAACTGTTCATCCTTGGTCATGCGGTT 76248
Query 5018 TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTC 5077
||||||| | | | ||| || | || |||| || || ||||||| || || || ||
Sbjct 76247 GTTCCAGTCGTGAAGATCCTTGGACAAGTCAATCTCCTCGGCAGTCCAGAAAGAGGCCTC 76188
Query 5078 CGCTTTTTTGTACATAGACCAAATATCAGGATACT 5112
|| || |||||||| ||| || ||| | ||||
Sbjct 76187 GGCCTTCTTGTACATTTGCCAGATCTCATGGTACT 76153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427047700296545
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |