Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq59 172 8e-38
>seq59
Length=151500
Score = 172 bits (190), Expect = 8e-38
Identities = 454/686 (66%), Gaps = 18/686 (3%)
Strand=Plus/Plus
Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984
||||||||||| || | ||| ||| |||||||| || || |||||||| | | |
Sbjct 87093 TCAAATTCATCGCCATAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTC 87152
Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044
|||| || | | || ||| || ||||| || | |||||| ||||| | |||| ||
Sbjct 87153 CAGTTGCCGTTCTTCTCAACACGCTTCATGAACAAATCAGGAATCCACAAGGCAAGGAAC 87212
Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104
| ||| || | | | || || || || ||||| ||||| || ||||| |
Sbjct 87213 AAATCGCGAGCACGAATCTCCTCCTTACCGTGGTTCTTCCGGAGATCAAGGAACTCGAAC 87272
Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164
| ||||| ||||| || || || || || || | | | || || || || ||||| |||
Sbjct 87273 ACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCGGGACGCTTGTTACCACCC 87332
Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224
||||| | || | || || || || | || | |||||| |||| ||||||||| ||
Sbjct 87333 TGATCGACGTAACGAGCAGTATTGTTGAAGACACGCAACATGGGAACAATACCGTTCGAG 87392
Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATA----TTACTAATGGATAT 78280
|| || || || |||| ||| ||| ||| | || || ||| ||| | || |
Sbjct 87393 GTACCGTTGGTGCCAGCAATGTAAGAACCAGTAGCACGGATACGGTGTAC--GTTGAGA- 87449
Query 78281 CCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACC 78340
|| || || || |||||||| || || | ||||||| || | || || ||||||||
Sbjct 87450 -CCAATGCCACCCGCCATCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTCATAGATACC 87508
Query 78341 CTCTATACTGTCATCCATCATGT-TAAGAAGAAAACAGCTAGACATTTGATGATGAACAG 78399
|| |||||||| ||| |||||| || ||| || || ||| | || | || ||
Sbjct 87509 TTCGATACTGTCCTCCTTCATGTCTACCAAG-AAGCAAGAAGAAAGCTGGGGCTGGGGAG 87567
Query 78400 TTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGT 78459
| || || || || | || ||||||||||| || || | || || | || ||||
Sbjct 87568 TACCAGCGTTGAAGAGGGTAGGAGATGCATGAGTGAAGAACTTGCTCGACATGAGGTTGT 87627
Query 78460 ATGTTTCAATAGCTGATTCTA---TGTC-CCATTGATGAATTCCTACCGCTACACGCATC 78515
| ||||| | | | || | |||| || | || || || |||||||||||
Sbjct 87628 AAGTTTCCAGAACACGCTCAACATTGTCACCCCAG----ATACCGACAGCTACACGCATA 87683
Query 78516 AACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCC 78575
| ||| |||||||| | ||||| |||| | | || | | || ||| |||||
Sbjct 87684 ATCATGTGCTGAGGACGCTCAACAATCTTGCCGTCAAGCTTGAGAAGATAGGATCTTTCC 87743
Query 78576 AAAGTTTTAAAACCAAAATAGTTGTA 78601
|| || || |||||||| || | |||
Sbjct 87744 AAGGTCTTGAAACCAAAGTACTGGTA 87769
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841
|| ||||| || |||| || || | || ||||| || ||||||||||| || || |||
Sbjct 85941 GTGAACTGGATAGGAGCAGCAGCAGCTTGGGTACGCAGGTAGTACATACCCGTCTTGAGA 86000
Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901
|| || |||| ||| ||| |||||||| || | || |||| || ||
Sbjct 86001 CCGAGCTTCCAACCGGCGAAGTGCATGCTGGTGATCTTACCCATGGTAGGGTCCTTCATG 86060
Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961
||||| |||| ||||||| ||||| || || || || | ||| |||||||||| | |
Sbjct 86061 TGAATGTTCAACGACTGAGACTGATCAATAAAGGCACCACGATCGGCCGCCATTTGAACA 86120
Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTG 76994
| || |||| ||| ||||||| || |||
Sbjct 86121 ACAGTGCGCTGAGAAATCTCCCAAACCGTCTTG 86153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694665630573600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |