Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq59 194 2e-44 >seq59 Length=151500 Score = 194 bits (214), Expect = 2e-44 Identities = 1207/1908 (63%), Gaps = 64/1908 (3%) Strand=Plus/Plus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| |||||||| || |||| | || | || ||||| || ||||||||||| || | Sbjct 85936 CAACAGTGAACTGGATAGGAGCAGCAGCAGCTTGGGTACGCAGGTAGTACATACCCGTCT 85995 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 | ||||| || |||| ||| ||| |||||||| || | || | || || Sbjct 85996 TGAGACCGAGCTTCCAACCGGCGAAGTGCATGCTGGTGATCTTACCCATGGTAGGGTCCT 86055 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 || ||||| |||| ||||||| ||||| || || || || | ||| |||||||||| Sbjct 86056 TCATGTGAATGTTCAACGACTGAGACTGATCAATAAAGGCACCACGATCGGCCGCCATTT 86115 Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611 | || || |||| ||| ||||||| || ||| | | ||||| ||| | | Sbjct 86116 GAACAACAGTGCGCTGAGAAATCTCCCAAACCGTCTTGTACAGAGACTTGATGTCAGCAG 86175 Query 75612 GAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668 ||| | | | || || || || ||| || || || || ||||| || | | Sbjct 86176 GAATGCTGGGGATGTTCTGGATAGAACCGTTGTCGGAAATGATACGGTTCTTCATGTTGT 86235 Query 75669 CATTCCACAATTTTCTCTCGGTTAAAA----CTCTAAGGAGATGAGGATTAACAATTTGA 75724 | ||||| | ||| || | | ||| | || || |||| || Sbjct 86236 CGGACCACAGAC----CAAGGTCAACCAGGTCACGAAGCAACCACGGGTTGACAACCTGG 86291 Query 75725 AATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCA 75784 || || |||| ||| || | || |||||| || || || || || | | || Sbjct 86292 AACTCACCAGCCAACACACGGCGCTGGTAAATGTTGGAAGTGTAAGGCTCGAAGCACTCG 86351 Query 75785 TTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTT 75844 ||||| |||| ||| || | || || || || |||||||| |||| || || | || Sbjct 86352 TTGTTACCCAGAATCTGGGACGTCGAGGCTGTGGGCATAGGGGCCAA-AAGAAGGGAGTT 86410 Query 75845 CTGAG-ACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATC--TGA 75900 || ||| || || | |||| | || || | | | ||||| ||||| || || || Sbjct 86411 GCGAACACCGTGCTGCT-TGATCTGGTCCTTCAAAGAGTTCCAGTCCCACAGGTCACTGG 86469 Query 75901 TGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAG-CATATGATCCATTAT 75959 |||| |||||||| | ||| | || || || || | | || || || || | | Sbjct 86470 GGGTA--ACATCCCACATGTCGAACTGAAGGATACCCT-GAGAGACAGGAGAACCCTCGT 86526 Query 75960 ATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAAT 76019 | || ||| | || || ||| | ||||| |||||| | ||| ||| | Sbjct 86527 AGGTCGAGTAGGGACCTTCAAGAATAGCAATATCGCACGACGCCTCGAGGGCAGCGTGGT 86586 Query 76020 AAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCA--AGACTATCAAAAGGATA 76077 |||| || || || |||| ||| || || | | || ||| ||||| ||||||| Sbjct 86587 AAATGGTCTCAAAGATCTGCTTGTTGAGCTGACGGGCCTCAGCAGACT--CAAAAGGC-- 86642 Query 76078 ATGTAAAAGAATA--AATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGT 76135 ||| || | | || ||||| || || |||||||| |||| ||| || || | || Sbjct 86643 ATGCGAAGGGCCAGGAAGGCATCAGCCAGACCCTGAACACCAACACCGATGGGGCGGTGG 86702 Query 76136 CTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTG 76195 | | | ||| | || || || ||||| | || | ||| ||||| || Sbjct 86703 CGCATGTTGCTGTTACGGGCCTCGATAACGGGGTAGTGGTTCACATCAATAATGCGGTTC 86762 Query 76196 AGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA----TTTTCC 76251 | || | ||||| || || || || | || || | || || | || | Sbjct 86763 AAGTTGCGAACAACGACCTTGGTGACATCGTGCAGCTTCTGGAAGTCGTAGGAGTTGTTG 86822 Query 76252 ATCTA-TCA-CAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTA 76309 | || ||| |||| | |||||| | ||| || || || || ||||| ||||||| Sbjct 86823 TTGTAGTCAACAAAGGCAGGAAGAGCAAGAGAAGCCAGGTTGCACACGGCAACCTCATCG 86882 Query 76310 GCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTT 76369 | | | || | || ||||| ||||| || || || |||||||| || || Sbjct 86883 GGAGCGCAGTACTCGATGATCTCAGTGCAAAGGTTGGAACTGCGAATAGTTCCCAGGTTC 86942 Query 76370 TGTTGGTTGCTCTTTTTGTTACA-TGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTC 76428 | ||||| ||||| ||| || ||| ||||| || || | || || | ||||| || Sbjct 86943 TTCTGGTTACTCTTGCGGTTGCAGTGA-TCCTTGTACAGCATGAAAGGGTTACCAGTCTC 87001 Query 76429 AATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG-CTTTTATTAT-AGATTTGTAT 76486 | |||| | || | |||| | ||| | | ||| | | || || | ||| | Sbjct 87002 AGTCTGAGCCTCCAAGATAGCATACCACA-GCTTCTGGGCCTTAATGGTCAGACGGCCA- 87059 Query 76487 CGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCC 76546 || ||| ||| || | ||||| | ||||||||||| || | ||| || Sbjct 87060 CGTCCCTCCTGTTCGTACTTGGTATAGAGAGCCTCAAATTCATCGCCATAGCAGTCAGCC 87119 Query 76547 AAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTC 76606 | ||||| || || || || ||||| | | ||| | || | | || ||| || ||| Sbjct 87120 AGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCAGTTGCCGTTCTTCTCAACACGCTTC 87179 Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT 76666 || || | |||||| ||||| | |||| || | ||| || | | | || || || Sbjct 87180 ATGAACAAATCAGGAATCCACAAGGCAAGGAACAAATCGCGAGCACGAATCTCCTCCTTA 87239 Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726 || ||||| ||||| |||||||| | | ||||| ||||| || || || || Sbjct 87240 CCGTGGTTCTTCCGGAGATCAAGGAACTCGAACACATCAGCGTGCCACGGCTCCAGGTAA 87299 Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786 || || | | |||| || || || ||||| |||||||| | || | ||||| || || Sbjct 87300 ATGGCAAAAGCACCGGGACGCTTGTTACCACCCTGATCGACGTAACGAGCAGTATTGTTG 87359 Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTT 76846 | || | |||||| |||| ||| ||||| || ||||| || || |||| ||| ||| Sbjct 87360 AAGACACGCAACATGGGAACAATACCGTTCGAGGTACCGTTGGTGCCAGCAATGTAAGAA 87419 Query 76847 CCACATGCACGAATA----TTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGAT 76902 ||| ||||| ||| ||| | | || || || || || ||||| || ||||| Sbjct 87420 CCAGTAGCACGGATACGGTGTAC--GTTG--AGACCAATGCCACCCGCCATCTTGGAGAT 87475 Query 76903 TAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGT-TAA 76961 | ||| || || | ||||||||||| || || ||||| || ||| |||||| || Sbjct 87476 CATAGCGCAAGTCTTGAGGGTGTCATAGATACCTTCGATACTGTCCTCCTTCATGTCTAC 87535 Query 76962 GAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATG 77021 ||| || || ||| | || | || ||| || || || || | |||||||||| Sbjct 87536 CAAG-AAGCAAGAAGAAAGCTGGGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGATG 87594 Query 77022 CATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATAT--- 77078 |||||||||| | || || | || ||||| ||||| | ||| || | || Sbjct 87595 CATGAGTGAAGAACTTGCTCGACATGAGGTTGTAAGTTTCCAGAACACGCTCAACATTGT 87654 Query 77079 ---CCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAG 77135 |||| || || ||||| |||||||| | ||| |||||||| || || ||| Sbjct 87655 CACCCCA------GATACCGACAGCTACACGCATAATCATGTGCTGAGGACGCTCAACAA 87708 Query 77136 TCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 77195 |||| | | || | | || ||| ||||||| || || |||||||| || | || Sbjct 87709 TCTTGCCGTCAAGCTTGAGAAGATAGGATCTTTCCAAGGTCTTGAAACCAAAGTACTGGT 87768 Query 77196 ATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTAT 77243 | ||||| | || || | ||| |||| | || | ||||||| Sbjct 87769 AGTTGAAGTCACGGTCATAGACAATGGCCGAGTCCAGCTCTTCCTTAT 87816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712931147236800