Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20omanensis_20[genbank_20GCA_5F000833645.1_202015-02-09] 6,542 sequences; 31,125,221 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq6529 156 9e-33 >seq6529 Length=132804 Score = 156 bits (172), Expect = 9e-33 Identities = 318/466 (68%), Gaps = 10/466 (2%) Strand=Plus/Minus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 |||||| ||||||| || |||| | |||||| ||||| | || || || ||| Sbjct 77465 TTTGCCCAGCGTCTGGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGTGCTTTT 77406 Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292 | | ||||| |||||||| || ||| ||||||| || || | | || |||||| Sbjct 77405 GCCTCTATCTTCTGGCTGCGCAAGCGTGGTATGATGCCCGGTCTGACTTTCTCCAACGAG 77346 Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTC 230352 | ||| ||| || |||||||| || | || | | ||| | | || | || Sbjct 77345 CTTATCTCTCGTGATGAGGGTCTTCACACGGACTTTGCCTGCCTTCTTTTCTCTCACCT- 77287 Query 230353 CAGAACAAGCTACCATTCGAGACGGTCAAACAA---ATCATTACAGAAGCAGTTGAAAAC 230409 |||||| | || | || | | | || ||||| || || || || | | Sbjct 77286 --GAACAACCGCCCCAGCAAGCAGTTGATCCAGGACATCATCACTGATGCCGTCGTCATT 77229 Query 230410 GAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACT 230468 || ||||||||| || || ||| |||| || ||| ||| | || ||||||||||| || Sbjct 77228 GAGAAGGAGTTCCTTACCGAGGCTCTTCCCTG-CGCTCTTCTCGGTATGAACGCTGACCT 77170 Query 230469 TATGG-GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGA 230527 ||| ||| || ||||| ||||| |||||||| || | || || || ||| |||| | Sbjct 77169 CATGAAGACC-TATATCGAGTTCGTCGCCGACCGTCTTCTGGTCGCTCTCGGTAACGACA 77111 Query 230528 AAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGA 230587 | |||||||| | |||||||| | ||||||||| ||| || ||| || |||| Sbjct 77110 AGGTGTACAAGGCCTCCAACCCCTTCGACTTTATGGAGAACATCTCCCTTGGTGGAAAGA 77051 Query 230588 CCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 ||||||||||||| |||||||| |||| || |||| | ||||||| Sbjct 77050 CCAACTTCTTCGAGAAGCGTGTTGGTGATTACCAGAAGGCTGGTGT 77005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057735333853460