Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20omanensis_20[genbank_20GCA_5F000833645.1_202015-02-09]
6,542 sequences; 31,125,221 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq6498 210 3e-49
seq6529 138 2e-27
>seq6498
Length=96284
Score = 210 bits (232), Expect = 3e-49
Identities = 640/973 (66%), Gaps = 22/973 (2%)
Strand=Plus/Plus
Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATTTCAGTGCA 79679
||||||| || || || || ||||||| || | | ||| || | || || ||||||||
Sbjct 27678 GATGCCAAGTTGCACACAGCGACCTCATCAGGAGC-GCAGTACTCGATAATCTCAGTGCA 27736
Query 79680 GAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 79739
||||| || ||| ||||| | || | ||| |||||||| ||| || |||
Sbjct 27737 AAGGTTGGAACTGCGAATAGTTCCCAGGTTCTTTTGGTTACTCTTGCGGTTGCAGTGATC 27796
Query 79740 CTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 79799
||| || | ||||| || ||||||| || |||||| ||| | ||| || | ||| |
Sbjct 27797 CTTGTACAACATGAAAGGGTTACCAGTCTCCGTCTGAGCTTCCAGAATGGCATACCACA- 27855
Query 79800 GACTC-GAGCCTTTATTATA-GACTTGTATCTCTTTTCTCTTTCGTA-TTGT-GTATATA 79855
| || ||||||| || || ||| | || || || | |||| ||| ||| | |
Sbjct 27856 GCTTCTGAGCCTTGATGGTAAGACGGCCACGTCCTTCCTGCT-CGTACTTGACGTAAAGA 27914
Query 79856 ATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCA 79915
| ||||| || || || | ||| | || ||||| || |||| || ||||| |
Sbjct 27915 GCC--TCGAATTCCTCACCGTAGCAATCAGCCAAGCCAGGGCACTCGTTGGGGCACATGA 27972
Query 79916 ACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 79975
| ||| || || | | || || || ||||| || | ||||| ||||| || || |
Sbjct 27973 GGGTCCATTCGCCGTTCTTCTCAACACGCTTCATGAACAAGTCAGGGATCCACAGGGCAA 28032
Query 79976 TAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 80035
|| | ||| | | | | |||||| || || ||||| ||| || ||||||
Sbjct 28033 GGAACAAATCGCGAGCGCGAATCTCCTCCTTACCGTGGTTCTTCCGAAGGTCAAGGAACT 28092
Query 80036 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTC 80095
| | | ||||| |||||||| |||| ||| ||||| | | | || || || ||||| |
Sbjct 28093 CAAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGACGCTTGTTGC 28152
Query 80096 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 80155
| |||||||| | ||| | || ||||| || | || | || ||| |||| |||||| |
Sbjct 28153 CACCCTGATCGACGTAACGGGCAGTGTTGTTGAACACACGCAGCATAGGAACAATACCGT 28212
Query 80156 TGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGA 80213
| || ||||| || || |||| || ||| ||| | ||||| ||| || ||||
Sbjct 28213 TCGAGGTACCGTTAGTGCCGGCAATGTAGGAACCAGTAGCACGGATACGGTGAACGTTGA 28272
Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273
|||| || || || ||||| || ||||| | || || || | |||||||||||
Sbjct 28273 --GACCGATACCACCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATCATAGAT 28330
Query 80274 GCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 80333
|| || || || || || |||||| | | || ||| ||| | || | ||
Sbjct 28331 ACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAAGCAGGAAGAAAGCTGAGGCTGAGG 28390
Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393
|| || || || || | ||||||||| ||||| || || | || |||| || ||
Sbjct 28391 GGTACCGGCGTTGAAGAGGGTAGGAGAGGCGTGAGTGAAGAACTTGCTCGACATGAGGTT 28450
Query 80394 GTACGTCTCAATAGCTGATTCTA---TATC-CCATTGATGAATTCCTACCGCGACACGCA 80449
||| || || | | | || | |||| || | || || || || |||||||
Sbjct 28451 GTAAGTTTCCAGAACACGCTCAACATTATCACCCCAG----ATACCGACAGCAACACGCA 28506
Query 80450 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTT 80509
| | |||||||||||| | || || |||||| || | || | | ||||||| |||
Sbjct 28507 TAATCATGTGCTGAGGACGCTCGACAATCTTGCCATCAAGCTTGAGAAGGTAAGATCTTT 28566
Query 80510 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 80569
||| || ||||| ||||| || | ||| ||||| || || || | || ||||||
Sbjct 28567 CCAGGGTCTTAAATCCAAAGTACTGGTAGTTGAAGTCACGGTCATAGACGATGGCCGAGT 28626
Query 80570 TGAGTTTATCCTT 80582
|| | |||||
Sbjct 28627 CCAGCTCTTCCTT 28639
>seq6529
Length=132804
Score = 138 bits (152), Expect = 2e-27
Identities = 372/566 (66%), Gaps = 10/566 (2%)
Strand=Plus/Plus
Query 49974 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 50033
||| |||||||| || | | || || |||||||| || || || |||||||| | ||
Sbjct 77319 GTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAGACCGGGCATCATACC 77378
Query 50034 ACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGC 50093
|||||| ||||| || || || ||||| | ||||| |||||||| || || || ||
Sbjct 77379 ACGCTTGCGCAGCCAGAAGATAGAGGCAAAAGCACCAGAGAAGAAGATACCCTCAACAGC 77438
Query 50094 GGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCACTTTTGAGC 50150
|||||||||||| || | || || || | | | ||||| |||||||| | ||
Sbjct 77439 GGCAAAGGCAACCAGACGCTGGGCAAAAGTCGACTCCTTGTCAGCAATCCACTTCAGGGC 77498
Query 50151 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 50210
||| |||||||| | || || || || || ||||| || ||||| || |
Sbjct 77499 CCAGTCGGCCTTGCGGCGAATGCAGGGAATAGTGTCAATGGCGTTGAAGAGGTATGTGCG 77558
Query 50211 ttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACATTTCCGAATGAATG 50268
| | | || || | || || || |||| ||||| || | ||||| || |||
Sbjct 77559 CTGAGCAGGCTCCTTGATGTAGGTGTCAATCAGCAAAGA--GTAGGTCTCCGAGTGGATG 77616
Query 50269 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTA 50328
|| || || ||||| || |||||||| || | || |||| ||||| || || | |
Sbjct 77617 TTCTCCATCATGATCTGGAAACCGTAGAAGCAACGGGCTTCGGGGATCTGGACCTCAGCA 77676
Query 50329 CAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAAT 50388
| || || || | || || || || || || |||||| || || || || || |
Sbjct 77677 GAGAAACGCTCGACCAAGTTCTCGTTGACAATACCGTCAGAAGCGGCGAAGAAGGCAAGA 77736
Query 50389 ACATG---TTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCT 50445
|| || | | || || | || || | | | || ||||| || | | |||
Sbjct 77737 ACGTGAGAGATGAAGAACTGCTCATCCTTTGTCATGCGGTTGTTCCAGTCGTGAAGATCC 77796
Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 50505
|| || | || | || || | ||||| || || ||||| ||||| || ||||| | |
Sbjct 77797 TTGGAAAGGTCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGC 77856
Query 50506 CAGATGTCATGATATTGGATTGGGAA 50531
||||| || || || | ||| |||||
Sbjct 77857 CAGATCTCGTGGTACTTGATAGGGAA 77882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718210063568880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |