Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20omanensis_20[genbank_20GCA_5F000833645.1_202015-02-09] 6,542 sequences; 31,125,221 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq6394 111 1e-19 >seq6394 Length=53086 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | |||||| ||||| || | ||| || ||| | || | ||||||||||| Sbjct 7037 GTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCGTCCTCCAGCTG 7096 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 || || ||||||| | | ||||| || ||||| ||||| || || || | ||| || Sbjct 7097 CTTACCCGCAAAGATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTTATCCTGAATCTT 7156 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 | ||||||| | ||| ||||||| | || || |||| |||||||| || ||||| Sbjct 7157 CGACTTGACGTTGTCGATGGTGTCAGAGGACTCAACCTCAAGAGTGATGGTCTTGCCAGT 7216 Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || |||||||||||||| Sbjct 7217 CAGAGTCTTGACAAAGATCTGCAT 7240 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCT 94856 |||| ||| | ||||| ||||| || | ||| || || || | || || |||| Sbjct 6348 ACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACA--GGGTACGACCGTCCT 6405 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 ||||||| || || ||||||| | | ||||| || ||||| || || || ||||| | Sbjct 6406 CCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCT 6465 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || ||||||| | | | || |||| ||||| |||| || ||||| | Sbjct 6466 GGATCTTGCTCTTGACGTTGTCAATGGTATCAGAAGACTCGACCTCAAGGGTAATGGTCT 6525 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || ||||| ||||| ||||||||||| Sbjct 6526 TTCCGGTCAGAGTCTTCACGAAGATCTGCAT 6556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448254540987120