Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20omanensis_20[genbank_20GCA_5F000833645.1_202015-02-09] 6,542 sequences; 31,125,221 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq6394 102 6e-17 >seq6394 Length=53086 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| | ||||||||||| || || || || ||||| || | || ||| | | | Sbjct 6569 ACGGAGAACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCCGAGAGAGTACGGCC 6628 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | |||||||| || || |||| |||||||| || || ||||| || || || Sbjct 6629 ATCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGTTGGTCCGGGGGAATACCCTCCTT 6688 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || ||||| || || ||| | || | || || |||| || || ||||| || | Sbjct 6689 GTCCTGAATCTTCGACTTAACATTGTCGATGGTATCCGACGACTCGACCTCAAGGGTAAT 6748 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| | || || || || |||||||| Sbjct 6749 TGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 6784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396246804475494