Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20omanensis_20[genbank_20GCA_5F000833645.1_202015-02-09] 6,542 sequences; 31,125,221 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq6394 89.7 4e-13 >seq6394 Length=53086 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| ||| | || ||||| ||||| || | || ||| | Sbjct 7240 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTCTTGAGGTTGAGTCCTCT 7181 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || |||||| ||||| || || | || ||| ||| Sbjct 7180 GACACCATCGACAACGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCGGACCAG 7121 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | ||||| | ||||||||| ||||||||||||| | || | | ||||||||| Sbjct 7120 CAGCGTCTTATCTTTGCGGGTAAGCAGCTGGAGGACGGCCGTACCCTTTCCGACTACAAC 7061 Query 107736 ATTCAAAAGGAGTCTAC 107752 || || ||||||||||| Sbjct 7060 ATCCAGAAGGAGTCTAC 7044 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || ||| | || || || ||||||||| | || ||| || Sbjct 6556 ATGCAGATCTTCGTGAAGACTCTGACCGGAAAGACCATTACCCTTGAGGTCGAGTCTTCT 6497 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | | || || ||||| || || || ||| | || ||| ||| Sbjct 6496 GATACCATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAG 6437 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | ||||| | ||| ||||| ||||||||||||| || || | ||||||||| Sbjct 6436 CAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGTACCCTGTCTGACTACAAC 6377 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 || || ||||||||||| | ||| |||| Sbjct 6376 ATCCAGAAGGAGTCTACCCTCCACCTGGT 6348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398844997303438