Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20omanensis_20[genbank_20GCA_5F000833645.1_202015-02-09] 6,542 sequences; 31,125,221 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq6394 111 2e-19 seq6490 102 8e-17 seq6283 89.7 5e-13 >seq6394 Length=53086 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || || || ||||| || |||||||||||| || ||| | ||| || Sbjct 7032 ACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCGTCCTCC 7091 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || ||||| || | ||||||||| || || || || || || || || ||| Sbjct 7092 AGCTGCTTACCCGCAAAGATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTTATCCTGA 7151 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | ||||| || || || || || ||||| ||||| || Sbjct 7152 ATCTTCGACTTGACGTTGTCGATGGTGTCAGAGGACTCAACCTCAAGAGTGATGGTCTTG 7211 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || || || || ||||| Sbjct 7212 CCAGTCAGAGTCTTGACAAAGATCTGCAT 7240 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || ||||| || ||||||||||| | ||| || ||| || Sbjct 6348 ACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGACCGTCCTCC 6407 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || ||||| || | ||||||||| || || || ||||| || || || || Sbjct 6408 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGG 6467 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | || || || || || || || || |||||||| || Sbjct 6468 ATCTTGCTCTTGACGTTGTCAATGGTATCAGAAGACTCGACCTCAAGGGTAATGGTCTTT 6527 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | ||| || ||||| || ||||| Sbjct 6528 CCGGTCAGAGTCTTCACGAAGATCTGCAT 6556 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || || || ||||| |||||||||||||| Sbjct 6558 CCACCACGGAGACGGAGAACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCCGAG 6617 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || ||||| || || || ||||||| ||||| || || || || Sbjct 6618 AGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGTTGGTCCGGGGGA 6677 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || ||||| || || || ||| | || || ||||| || || Sbjct 6678 ATACCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATGGTATCCGACGACTCGACC 6737 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| || || ||||| | || || |||||||| ||||| Sbjct 6738 TCAAGGGTAATTGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 6784 >seq6490 Length=90610 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || ||||||||||| || |||| | || || ||||| ||||| || |||| Sbjct 85284 CCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAAA 85225 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| |||||||| || || || ||||| || || || || || || ||||| || Sbjct 85224 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 85165 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||| || || || || || || || || || ||||| || | || ||||||| Sbjct 85164 CGATCGTGTCCGAGGACTCGACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTAACGA 85105 Query 134704 AAATTTGCATTTTG 134717 |||| ||||| ||| Sbjct 85104 AAATCTGCATCTTG 85091 >seq6283 Length=33863 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||| ||||| || ||||||||||| Sbjct 31285 CCACCACGGAGACGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAC 31226 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| || || |||| ||||| || || || || Sbjct 31225 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGGGGA 31166 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | ||||| || || || || Sbjct 31165 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACC 31106 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 || || || ||||| ||||| || | || || |||||| Sbjct 31105 TCCAGGGTGATGGTCTTACCCGTCAGGGTCTTGACGAAA 31067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505357071045840