Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20omanensis_20[genbank_20GCA_5F000833645.1_202015-02-09] 6,542 sequences; 31,125,221 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq6529 114 2e-20 >seq6529 Length=132804 Score = 114 bits (126), Expect = 2e-20 Identities = 326/497 (66%), Gaps = 12/497 (2%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || ||||| ||||||||||||||||| ||||| || | | | ||| ||||||||| Sbjct 77020 TAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCACCAAGGGAGATGTTCTCCATA 77079 Query 129788 AAATCAAATGGGTT-----CTTTGAGTTCCAAATTGCTGGCACTCCAATCTGTTTGAGGA 129842 || || || ||||| | ||| | || ||| | || | | || | Sbjct 77080 AAGTCGAAGGGGTTGGAGGCCTTG---TACACCTTGTCGTTACCGAGAGCGACCAGA--A 77134 Query 129843 GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGT 129902 |||| || | |||| |||| || || ||| || | ||||||||||| || Sbjct 77135 GACGGTCGGCGACGAACTCGATATAGGTCTTCATGAGGTCAGCGTTCATACCGAGAAGAG 77194 Query 129903 TACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGG 129962 || || || || || | |||| ||||||||||| | || || || | |||| Sbjct 77195 CGCAGGGAAGAGCCTCGGTAAGGAACTCCTTCTCAATGACGACGGCATCAGTGATGATGT 77254 Query 129963 CGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACT 130022 | || || || | ||| || | ||| || ||| || |||||| | Sbjct 77255 CCTGGATCAACTGCTTGCTGGGGCGGTTGTTCAGGTGAGAGAAAAGAAGGCAGGCAAAGT 77314 Query 130023 CCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 130082 || ||| |||||||| ||||| ||||| || || || ||||| |||||| ||||| | Sbjct 77315 CCGTGTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAGACCGGGCATCA 77374 Query 130083 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 130142 ||| ||||| || |||||| || | ||| | |||||||||||||| ||||| | Sbjct 77375 TACCACGCTTGCGCAGCCAGAAGATAGAGGCAAAAGCACCAGAGAAGAAGATACCCTCAA 77434 Query 130143 CACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTC 130201 || || || |||| ||||||| ||||| | || | |||| | ||| ||||||| Sbjct 77435 CAGCGGCAAAGGCAACCAGACGCTGGGCAAAAG-TCGACTCCTTGTCAGCAATCCACTTC 77493 Query 130202 ATCGCCCACTGCGCCTT 130218 | ||||| | ||||| Sbjct 77494 AGGGCCCAGTCGGCCTT 77510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618384627461520