Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20omanensis_20[genbank_20GCA_5F000833645.1_202015-02-09]
6,542 sequences; 31,125,221 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq6498 233 2e-56
seq6529 129 7e-25
>seq6498
Length=96284
Score = 233 bits (258), Expect = 2e-56
Identities = 899/1396 (64%), Gaps = 37/1396 (3%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| | ||||| || || ||||||| || || | |||| |||
Sbjct 28522 CCTCAGCACATGATTATGCGTGTTGCTGTCGGTATCTGGGGTGATAATGTTGAGCGTGTT 28463
Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339
|||| || ||| || ||||| |||| | | ||| |||||| | || |||||||
Sbjct 28462 CTGGAAACTTACAACCTCATGTCGAGCAAGTTCT--TCACTCACGCCTCTCCTACCCTCT 28405
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
|||| || ||||| || || || | || |||||| | | | || |||||||
Sbjct 28404 TCAACGCCGGTACCCCTCAGCCTCAGCTTTCTTCCTGCTTCTTGGTAGACATGAAGGAGG 28345
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
|| ||| | |||||||||| || || | | ||||| ||||| ||| ||| |
Sbjct 28344 ACAGTATCGAAGGTATCTATGATACCCTCAAGACCTGTGCTATGATCTCCAAGATGGCGG 28285
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519
| ||||| || | || | || | | | || | | || ||| || || |
Sbjct 28284 GTGGTATCGGTCTCAACGTTCACCGTATCCGTGCTACTGGTTCCTACATTGCCGGCACTA 28225
Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579
| ||| || | |||||| |||| ||||| || || || ||| ||| || || || |
Sbjct 28224 ACGGTACCTCGAACGGTATTGTTCCTATGCTGCGTGTGTTCAACAACACTGCCCGTTACG 28165
Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
| |||| | ||| ||||| || || | || | || || ||||| ||||
Sbjct 28164 TCGATCAGGGTGGCAACAAGCGTCCT---GGTGCTTTTGCCATTTACCTGGAGCCGTGGC 28108
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAG--GCGCG 104691
|||| ||| | | ||||||||||| | || ||||| ||| | |||||| ||||
Sbjct 28107 ACGCTGATGTGTTTGAGTTCCTTGACCTTCGGAAGAACCACGGTAAGGAGGAGATTCGCG 28048
Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751
| |||||| | ||| || || ||||| || || | ||||||||| | |||||| |
Sbjct 28047 CT--CGCGATTTGTTCCTTGCCCTGTGGATCCCTGACTTGTTCATGAAGCGTGTTGAGAA 27990
Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811
|| ||| | ||| | ||| | || || || || ||||| | | ||| | ||
Sbjct 27989 GAACGGCGAATGGACCCTCATGTGCCCCAACGAGTGCCCTGGCTTGGCTGATTGCTACGG 27930
Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTC--GGGCGACTGCGACG 104869
|||||| || || || |||||| ||||||||| | ||||| | || || || ||
Sbjct 27929 TGAGGAATTCGAGGCTCTTTACGTCAAGTACGAGCAGGAAGGACGTGGCCGTCT--TACC 27872
Query 104870 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928
| | || | || | ||||| | || ||||| | |||| || |||||||||| ||
Sbjct 27871 AT-CAAGGCTCAGAAGCTGTGGTATGCCATTCTGGAAGCTCAGACGGAGACTGGTAACCC 27813
Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988
| |||| | ||||| || ||| |||| |||||||| |||||||| |||| ||
Sbjct 27812 TTTCATGTTGTACAAGGATCACTGCAACCGCAAGAGTAACCAAAAGAACCTGGGAACTAT 27753
Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048
|||||||| || || || || || | || | | |||||| |||||
Sbjct 27752 TCGCAGTTCCAACCTTTGCACTGAGATTATCGAGTACTGCGCTCCTGATGAGGTCGCTGT 27693
Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTTG 105107
||| ||| | ||||| | |||||||| | ||| || | || |||| | | |
Sbjct 27692 GTGCAACTTGGCATCGCTTGCTCTCCCTGCCTTTGTTGACTACACCAACAACTGC-TACG 27634
Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167
| | | || || ||||| || || || ||| | ||| | ||| | | ||||
Sbjct 27633 ACTTCCAGAAGCTGCACGATGTCACCAAGGTTGTTGTCCGCAACTTGAACCGTATCATTG 27574
Query 105168 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227
|| || ||||| |||| || || || ||| ||| | |||||||| ||||
Sbjct 27573 ATGTGAACCACTACCCTGTTGTCGAGGCCCGGAACAGTAACATGCGTCACCGTCCCATTG 27514
Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGATT 105284
|| | |||||||||||||| || |||| ||| | ||| || | | ||||| |
Sbjct 27513 GTGTTGGTGTTCAGGGTCTGGCCGATGCGTTCCTGGCCCTTCGTATGC---CTTTTGAGT 27457
Query 105285 CCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTG 105344
| | ||| || | |||| || || ||||||||||| || ||||| || || |
Sbjct 27456 CTGCCGAGGCTCGTCAGCTCAACAAGCAGATCTTTGAGACCATTTACCACGCTGCCCTGG 27397
Query 105345 AGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 105404
|||| | || | || | ||||| ||| | || || | ||||| ||||| |
Sbjct 27396 AGGCTTCGTGCGATATCGCTGCTGTTGAAGGTACTTACTCGACGTACGAGGGATCTCCTG 27337
Query 105405 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCAC---TACG 105461
||| || || | ||||| || || ||||||| | || | || || | || | |
Sbjct 27336 TTTCTCAGGGTATCCTTCAGTTCGACATGTGGG-ATGTCACCCCCAG--TGACCTGTGGG 27280
Query 105462 ACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGG 105521
| ||| | || | ||||| | |||||| |||| ||| |||| ||| || || |||
Sbjct 27279 ATTGGAACTCTTTGAAGGAGCAGATCAAGCAGAACGGTGTTCGCAACTCGCTGCTTCTGG 27220
Query 105522 CTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCT 105581
| || ||||| || || || || | || || ||||||| || || ||||| || || |
Sbjct 27219 CGCCCATGCCCACTGCGTCAACTTCTCAGATTCTGGGTAACAACGAGTGCTTCGAGCCTT 27160
Query 105582 ACACGACGAACATCTA 105597
|||| ||||||| ||
Sbjct 27159 ACACTTCGAACATTTA 27144
>seq6529
Length=132804
Score = 129 bits (142), Expect = 7e-25
Identities = 212/303 (70%), Gaps = 6/303 (2%)
Strand=Plus/Minus
Query 94656 GGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCT 94715
|||||| ||| | || || |||| || || ||||| |||| || | | ||
Sbjct 77607 GGAGACCTACTCTTTGCTGATTGACACCTACATCAAGGAGCCTGCTCAGCGCACATACCT 77548
Query 94716 CTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTG 94775
||| | ||||| | || |||| || |||| || || || ||||| |||||||
Sbjct 77547 CTTCAACGCCATTGACACTATTCCCTGCATTCGCCGCAAGGCCGACTGGGCCCTGAAGTG 77488
Query 94776 GTTTGAT-ACAA--AGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832
| ||| | |||| ||||| || |||| |||| || | || ||||| ||||||
Sbjct 77487 GATTGCTGACAAGGAGTCGACTT---TTGCCCAGCGTCTGGTTGCCTTTGCCGCTGTTGA 77431
Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892
||||||||||||||||||| | || | |||| | ||||| ||||| ||| | ||
Sbjct 77430 GGGTATCTTCTTCTCTGGTGCTTTTGCCTCTATCTTCTGGCTGCGCAAGCGTGGTATGAT 77371
Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 94952
||| ||||| |||||||||||||||||||||||||| ||||| || ||| || ||
Sbjct 77370 GCCCGGTCTGACTTTCTCCAACGAGCTTATCTCTCGTGATGAGGGTCTTCACACGGACTT 77311
Query 94953 TGC 94955
|||
Sbjct 77310 TGC 77308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583213103848080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |