Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20omanensis_20[genbank_20GCA_5F000833645.1_202015-02-09] 6,542 sequences; 31,125,221 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq6394 98.7 7e-16 seq6490 84.2 1e-11 >seq6394 Length=53086 Score = 98.7 bits (108), Expect = 7e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||| || ||||| || || || ||||| ||||| ||| | Sbjct 7012 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAGACCATTACCCTCGAGGTTGAGTCCTCC 6953 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | || | || || ||||| || ||| | || || || || Sbjct 6952 GATACCATTGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 6894 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || || ||||| || || || || | ||||| | ||||||||| Sbjct 6893 GCAGCGCCTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCCGATTACAA 6834 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 6833 CATCCAGAAGGAGTCCAC 6816 >seq6490 Length=90610 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||||||||||||||| ||||| ||||| || |||||||| || || || || ||| Sbjct 85092 AAGATGCAGATTTTCGTTAAGACCCTTACGGGTAAGACGATCACCCTTGAGGTCGAGTCC 85151 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 ||||||| | || | | || || || ||||| || || | || || || Sbjct 85152 TCGGACACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGAC 85211 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||||| | || || || ||||| || ||||| || | ||||| | || ||| Sbjct 85212 CAGCAGCGCCTGATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTTTCTGACTAC 85271 Query 23788 AACATACAAAA 23798 ||||| || || Sbjct 85272 AACATCCAGAA 85282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337982650283336