Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20omanensis_20[genbank_20GCA_5F000833645.1_202015-02-09]
6,542 sequences; 31,125,221 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq6394 98.7 7e-16
seq6490 84.2 1e-11
>seq6394
Length=53086
Score = 98.7 bits (108), Expect = 7e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || ||||| || ||||| || || || ||||| ||||| ||| |
Sbjct 7012 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAGACCATTACCCTCGAGGTTGAGTCCTCC 6953
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| ||| | || | || || ||||| || ||| | || || || ||
Sbjct 6952 GATACCATTGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 6894
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || || || ||||| || || || || | ||||| | |||||||||
Sbjct 6893 GCAGCGCCTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCCGATTACAA 6834
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 6833 CATCCAGAAGGAGTCCAC 6816
>seq6490
Length=90610
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| ||||||||||||||||| ||||| ||||| || |||||||| || || || || |||
Sbjct 85092 AAGATGCAGATTTTCGTTAAGACCCTTACGGGTAAGACGATCACCCTTGAGGTCGAGTCC 85151
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
||||||| | || | | || || || ||||| || || | || || ||
Sbjct 85152 TCGGACACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGAC 85211
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||||| | || || || ||||| || ||||| || | ||||| | || |||
Sbjct 85212 CAGCAGCGCCTGATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTTTCTGACTAC 85271
Query 23788 AACATACAAAA 23798
||||| || ||
Sbjct 85272 AACATCCAGAA 85282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337982650283336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |