Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20savannae_20[genbank_20GCA_5F001483325.1_202015-12-30] 361 sequences; 28,542,441 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq26 190 3e-43 >seq26 Length=269500 Score = 190 bits (210), Expect = 3e-43 Identities = 638/978 (65%), Gaps = 20/978 (2%) Strand=Plus/Minus Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTC 62805 |||| || |||| || || || || ||||||| || | | ||| || | || ||||| Sbjct 167192 GCAAGCGACGCCAAGTTGCACACAGCCACCTCATCAGGAGC-GCAGTACTCGATAATCTC 167134 Query 62806 AGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 62865 ||||||||| || || || ||||| | || | || |||||||| ||| || Sbjct 167133 AGTGCAAAGGTTGGAACTGCGAATAGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCA 167074 Query 62866 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 62925 |||||| || | ||||| || ||||||| || |||||| ||| | ||| || | Sbjct 167073 GTGATCCTTGTACAACATGAAAGGGTTACCAGTCTCCGTCTGAGCTTCCAGAATAGCATA 167014 Query 62926 CCAGACGACTC-GAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTTTCGTA--TAGTG 62981 ||| | | || ||||||| || || || | || || | | ||||| | | Sbjct 167013 CCACA-GCTTCTGAGCCTTGATGGTAAGACGGCCACGTCCTTCC-CGCTCGTACTTGACG 166956 Query 62982 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGAC 63041 || | | | || || || || || || || ||| ||||| || || | || | Sbjct 166955 TAAAGAGCC--TCAAATTCCTCACCGTAACAATCAGCCAAGCCAGGGCACTCGTTGGGGC 166898 Query 63042 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63101 |||| | | ||| || |||| | || || || ||||| || | ||| || ||||| | Sbjct 166897 ACATGAGGGTCCATTCGCCGTTCTTCTCAACACGCTTCATGAACAAATCGGGGATCCACA 166838 Query 63102 GAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63161 | || | || | ||| | | | | ||||| || || ||||| || || | Sbjct 166837 GGGCAAGGAACAAATCGCGAGCGCGAATCTCCTCCTTACCGTGGTTCTTCCGGAGGTCAA 166778 Query 63162 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63221 ||||| | | | ||||| |||||||| |||| ||| ||||| | | | ||||| || | Sbjct 166777 GGAACTCAAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCAGGACGCT 166718 Query 63222 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63281 |||| || |||||||| | ||| | ||| |||||||| | || | || ||| |||| || Sbjct 166717 TGTTACCACCCTGATCGACGTAACGAGCAGTGTTATTGAAGACACGCAGCATAGGAACAA 166658 Query 63282 TACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAA 63341 |||| || || ||||| ||||| || | |||||| || | ||||| ||| | | Sbjct 166657 TACCGTTCGAGGTACCGTTGGTGCCGGCAATATAGGAACCGGTAGCACGGATACGG-TGA 166599 Query 63342 TTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCA 63400 | | ||||| || || || ||||| || ||||| | || || || | |||||| Sbjct 166598 GCGTTGAGACCGATACCACCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATCA 166539 Query 63401 TAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA 63460 ||||| || || ||||| || ||| |||||| | | || ||| ||| | || | Sbjct 166538 TAGATACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAAGCAGGAAGAAAGCTGAGGC 166479 Query 63461 CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGT 63520 || || || || || || | ||||||||| |||||||| || | || || | Sbjct 166478 TGAGGGGTACCGGCGTTGAAGAGGGTAGGAGAGGCGTGAGTGAAGAACTTGCTCGACATG 166419 Query 63521 AGATTGTACGTCTCAATAGCTGAGTCTA---TATC-CCATTGATGAATTCCTACTGCGAC 63576 |||||||| || || | | | || | |||| || | || || || || || Sbjct 166418 AGATTGTAAGTTTCCAGAACACGCTCAACATTATCACCCCAG----ATACCGACAGCAAC 166363 Query 63577 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGA 63636 |||||| | |||||||||||| | || || |||||| | | || | | ||| || Sbjct 166362 ACGCATAATCATGTGCTGAGGACGCTCGACAATCTTGCCATCAAGCTTGAGAAGGTAAGA 166303 Query 63637 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 63696 | |||||| || || || ||||| || | || ||||| || || || | ||| | Sbjct 166302 TCTTTCCAGGGTCTTGAATCCAAAGTACTGATAGTTGAAGTCACGGTCATAGACAATGGC 166243 Query 63697 CGAGTTGAGTTTATCCTT 63714 ||||| || | ||||| Sbjct 166242 CGAGTCCAGCTCTTCCTT 166225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629140735600