Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20savannae_20[genbank_20GCA_5F001483325.1_202015-12-30] 361 sequences; 28,542,441 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq9 105 5e-17 >seq9 Length=407631 Score = 105 bits (116), Expect = 5e-17 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || || || || || ||||| || ||||| ||||| || |||||||| ||| Sbjct 286452 ACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGATGCTGGTTTGATT 286511 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| ||||| ||||| ||||| ||||| || |||||||||||||| | || || || Sbjct 286512 GCTGGTCTTAACGTTCTCCGTATCATCAACGAGCCTACTGCTGCTGCCATCGCCTACGGT 286571 Query 550529 CTTGATAA 550536 ||||| || Sbjct 286572 CTTGACAA 286579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029276908691890