Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20savannae_20[genbank_20GCA_5F001483325.1_202015-12-30] 361 sequences; 28,542,441 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq44 109 4e-18 >seq44 Length=213652 Score = 109 bits (120), Expect = 4e-18 Identities = 161/222 (73%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGA 480608 ||| |||||||| ||||| ||||| || ||| |||| ||| || || || | || Sbjct 152233 ACGCAGACGGAGAACAAGGTGAAGGGTGGACTC-CTTTTGAATG-TTGTAGTCCGAGAGC 152290 Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 || | | ||| ||||| ||||| ||||| ||||| || || || || || || ||||| Sbjct 152291 GTACGGCCATCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATA 152350 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGT-GTGTGAAGTTTC 480727 || |||||||| |||||||| |||||| ||||| ||||| | | | | | | Sbjct 152351 CCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTATCCGACGACTCGACCT-C 152409 Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||||| || || ||||| || ||||| |||||||| || Sbjct 152410 AAGGGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAAATCTG 152451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268163714958428