Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20savannae_20[genbank_20GCA_5F001483325.1_202015-12-30] 361 sequences; 28,542,441 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq61 150 1e-31 >seq61 Length=168845 Score = 150 bits (166), Expect = 1e-31 Identities = 220/311 (71%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||| ||||| | |||| | |||| ||||||||| ||||| || | | ||| Sbjct 27618 GTCTCGGGGTTCTTGCATTTCTTGCACAGGACAAACTTGGTAATGAAGCCGTAGACGAGG 27677 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||||| | ||| | ||| || || ||||||| ||| | || |||| ||| ||| Sbjct 27678 TCCTGGAGCTTCTTGTTGTCATGAGAACCGTTGATGATCCAGCGGTCGTCCTTGGGGTCG 27737 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | || || ||||| |||||| | || |||||||| | |||| | | ||||| Sbjct 27738 TTGTTGGTCTGGGCGCCAAGCTCGAAACCAAAGTACTTGATGAGGTAGGAGCCAGGACGG 27797 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 |||||| || |||||| | || | |||| || ||| |||||||| ||||||||||| Sbjct 27798 GCAAGCGACTGGGCGATCTGGGAAAGGTTGGTGACGACGGTCTTGATACCGTTGCCCTTG 27857 Query 34561 CCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTG 34620 ||||||| ||||| |||||| ||||| ||||| ||||||||| ||| | | || | Sbjct 27858 CCTTCGATCTTGGTTTGGATGCGGGGCATCTTGTACCGGTAGAACTGGTCGGTGATATCG 27917 Query 34621 CGGTTAACGTT 34631 |||| ||||| Sbjct 27918 GGGTTGACGTT 27928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839783625973