Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20savannae_20[genbank_20GCA_5F001483325.1_202015-12-30] 361 sequences; 28,542,441 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq44 89.7 4e-13 >seq44 Length=213652 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || ||| | || || || ||||| || |||| ||| || | Sbjct 152226 ATGCAGATCTTCGTGAAGACTCTGACCGGAAAGACCATCACTCTCGAGGTCGAGTCTTCC 152167 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | | || || ||||| || || || || | ||| ||| ||| Sbjct 152166 GATACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 152107 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | ||||| | ||| ||||| ||||||||||||| | || || | ||||||||| Sbjct 152106 CAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTGTCTGACTACAAC 152047 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 || || |||||||| || | ||| |||| Sbjct 152046 ATCCAGAAGGAGTCCACTCTCCACCTGGT 152018 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| ||||| || | || ||||| ||||||||| | || ||| | Sbjct 152454 ATGCAGATTTTCGTCAAGACCCTGACCGGCAAGACCATTACCCTTGAGGTCGAGTCGTCG 152395 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | | || || |||||| || || || || | ||| ||| ||| Sbjct 152394 GATACCATTGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAG 152335 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || |||| || ||||| ||||| ||||| | | || | ||||||||||| Sbjct 152334 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGTACGCTCTCGGACTACAAC 152275 Query 107736 ATTCAAAAGGAGTCTAC 107752 |||||||||||||| || Sbjct 152274 ATTCAAAAGGAGTCCAC 152258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875045066729