Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20savannae_20[genbank_20GCA_5F001483325.1_202015-12-30] 361 sequences; 28,542,441 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq32 86.0 1e-11 >seq32 Length=251022 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 279870 TAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAAT 279929 || ||||||| |||| || ||||| ||| | || | ||||||||| || || Sbjct 79147 TATTGGATGGACTGAAGCCGGGTCAGCGCAAGGTCATGTATGCTTGTTTCAAGAGTAACG 79088 Query 279930 TGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATC 279989 |||| ||||| || |||| | |||| || ||||||||||| | || | || | Sbjct 79087 TGGTCAAGGACATGAAGGTTGTTGAGTTGGCTGGTTATGTTTCTGGTCAGACGTCGTACC 79028 Query 279990 ATCACGGTGAAGCGTCTCTTCAAGGTGCTATTGTAGGTCTTGCCCAAGATTTTATGGCTT 280049 | ||||||||||| || || || | ||| | |||||||| || || ||| | | || Sbjct 79027 AACACGGTGAAGCTTCCCTGCAGCAGACGATTATTGGTCTTGCTCAGGACTTTGTCGGTT 78968 Query 280050 CAAACAACTTAAATCTGCTTTCACCAAATGGTCAATTTGGTTCTCGTATT 280099 | |||||| | ||| || ||| | |||| | || ||||||||| || Sbjct 78967 CTAACAACGTCAATTGCCTGGAACCCAGTGGTAACTTCGGTTCTCGTCTT 78918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186807310619921