Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20savannae_20[genbank_20GCA_5F001483325.1_202015-12-30] 361 sequences; 28,542,441 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq185 132 4e-26 >seq185 Length=20677 Score = 132 bits (146), Expect = 4e-26 Identities = 344/518 (66%), Gaps = 15/518 (3%) Strand=Plus/Plus Query 4584 ATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATA 4643 || || ||||| || || || || |||||||| ||||| | ||| ||||| || || Sbjct 17031 ATAAGCTCGTTGGAGAAAGTCAAACCGGGCATCAAACCACGCTTGCGCAGCCAGAAGATG 17090 Query 4644 GCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGG-GA 4702 | |||||| | ||||| ||||| || || || || ||||| || || || | || || Sbjct 17091 GAGGCAAAAGCACCAGAGAAGAAGATACCCTCAACAGCGGCGAAGGCAACAAGACGCTGA 17150 Query 4703 CCCGAA--CGAGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTA 4760 | || ||| || | ||||| ||||||| || | ||||||| || || | Sbjct 17151 GCAAAAGTCGA-CT--CCTTGTCAGTAATCCACTTCAGGGCCCAGTCGGCCTTGCGGCGA 17207 Query 4761 ACGCACGGAATTGTGTATATAGCGTTAAATA---ATTTACTTTTTTCAAATGGGTCTTGA 4817 | ||| ||||| |||| || ||||| || | || | | | || || || | | Sbjct 17208 ATGCAGGGAATAGTGTCAATGGCGTTGAAGAGGTATGTGCGCTGAGCA---GGCTCCTTA 17264 Query 4818 ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGA 4877 || || ||||| || || | ||| | || || || || || || || ||||| Sbjct 17265 ATGTAGGTGTCAATCAGCAAAGAGTACGTCTCCGAGTGAATGTTCTCCATCATGATCTGG 17324 Query 4878 AATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAG 4937 || ||||| ||||| | ||||| | | ||||| || | | || | || || ||| Sbjct 17325 AAACCGTAGAAGCAACGGGCTTCAGGGATCTGAACCTCAGCAGAGAAACGCTCGACCAAG 17384 Query 4938 TTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTAC 4997 || ||||| || ||||||||| ||| || || || || | ||| ||||| || ||| || Sbjct 17385 TTCTCGTTAACAATACCGTCAGAGGCGGCGAAGAAGGCAAGAACGTGAGAGATGAAGAAC 17444 Query 4998 TGTTCGTC---AGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCT 5054 ||||| || || | | | || ||||||| | | | ||| || | | |||| || Sbjct 17445 TGTTCATCCTTAGTCATGCGGTTGTTCCAGTCGTGAAGATCCTTGGAAAGGTCAATCTCC 17504 Query 5055 TCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 || | ||||| || || || || || ||||||||||| Sbjct 17505 TCGGCGGTCCAGAAAGAGGCCTCGGCCTTTTTGTACAT 17542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427047721115213