Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq4739 96.9 2e-15
>seq4739
Length=56954
Score = 96.9 bits (106), Expect = 2e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| || || |||||||||||||||| ||| | || || | |||||||||||||||
Sbjct 21097 TCCTTTTGGATGTTGTAGTCGGACAAGGTTCGGCCATCCTCAAGTTGCTTGCCTGCGAAA 21038
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
||||| ||||| || || || | | ||||||||| ||||| ||| | || |
Sbjct 21037 ATGAGTCGCTGTTGATCAGGTGGGATACCCTCCTTGTCTTGGATCTTGGACTTCACATTG 20978
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | ||||| ||||| || |||| ||||| || || || || | || || ||
Sbjct 20977 TCGATAGTATCGGAGGATTCAACTTCCAAAGTGATTGTCTTTCCAGTCAAGGTCTTAACG 20918
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 20917 AAGATCTGCAT 20907
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || || || | ||||||| ||| | || || || || || ||||||||||||
Sbjct 21362 TCCTCCACGTAGACGAAGCACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAGTCGCT 21303
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| ||| | || ||||| ||||| || |||||||| | ||||| ||||| ||
Sbjct 21302 AAGGGTACGACCATCCTCCAATTGCTTACCAGCGAAAATCAATCGCTGTTGGTCTGGTGG 21243
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| | |||||| || ||||| ||| | || | || | || | || || ||
Sbjct 21242 AATACCCTCCTTATCCTGGATCTTGGACTTGACATTATCAATTGTGTCCGAAGACTCAAC 21183
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||| || || ||||| || | ||| || ||||||||||||||
Sbjct 21182 CTCTAACGTAATTGTCTTGCCTGTCAAAGTCTTGACAAAGATCTGCAT 21135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323053301097440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |