Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq4739 91.5 1e-13
>seq4739
Length=56954
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||| | | ||| | ||| || || || ||||| || ||||| |||||||| ||
Sbjct 20905 CCACCACGGAGTCTGAGAACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCCGAG 20846
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| ||| |||| || | |||||| |||||| | || | |||||||||||| ||||
Sbjct 20845 AGAGTTCGTCCGTCCTCAAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCCGGTGGA 20786
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| || || || || ||| || ||| || | || ||||| ||| ||| ||
Sbjct 20785 ATACCCTCCTTATCCTGAATCTTCGACTTAACGTTGTCAATGGTGTCGGATGATTCGACC 20726
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTAC 15351
|| | |||||||| || || |||| ||| || ||
Sbjct 20725 TCGAGAGTAATGGTCTTGCCAGTCAAAGTCTTGAC 20691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362158237633809
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |