Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10- 27] 4,749 sequences; 51,524,987 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq4739 86.0 6e-12 >seq4739 Length=56954 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/153 (73%), Gaps = 4/153 (3%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCT 94856 |||||||| | |||||| ||||| || | ||| |||||| | || || || |||| Sbjct 20604 ACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGG--AAAGGGTACGACCGTCCT 20547 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | ||||| || ||| | ||||| || | ||| || ||||||||||| ||||| ||||| | Sbjct 20546 CGAGCTGCTTGCCGGCGAAGATCAAGCGTTGTTGGTCTGGAGGAATGCCTTCCTTGTCCT 20487 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAG 94949 || || | ||||||| | ||| || |||| Sbjct 20486 GGATCTTGGACTTGACGTTGTCGATGGTATCAG 20454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448264588313640