Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq4538 309 8e-79
seq678 125 2e-23
>seq4538
Length=19519
Score = 309 bits (342), Expect = 8e-79
Identities = 1163/1799 (65%), Gaps = 60/1799 (3%)
Strand=Plus/Plus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450
||||||| ||||| | ||| ||| || || ||| || |||| | ||| |||
Sbjct 6711 TTCGGATTCAAGACCCTCGAGCGATCATATCTCCTCCGTCTCGATGGCAAGATTTGCGAA 6770
Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510
|| || || |||||| | |||||||||||| ||||||| || | || |||| ||
Sbjct 6771 CGTCCACAACATATGATTATGCGTGTTGCTGTTGGTATTCACGGTGATAATATTGAGGCT 6830
Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGC-TCGTGTA-TTCACGCACGCCACGCCAACAA 363568
|| ||||| || || || ||| | || | | || || || |||||| | ||||||
Sbjct 6831 GCCATTGAGACCTACAA-CTT-GATGTCCAGCAAATACTTTACCCACGCCTCTCCAACAC 6888
Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628
| | |||||| |||| | |||| | || || || || || | | |||||||
Sbjct 6889 TTTTTGCTGCTGGTACTCCACAAGCACAACTCTCATCATGTTTCCTCATCGACATGAAGG 6948
Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688
| || ||| || ||||| | |||||| | |||| ||| ||| | ||||| ||||| |
Sbjct 6949 AGGACAGCATTGATGGTATTTATGACACTTTGAAGACTTGCGCTATGATTTCTAAGAACG 7008
Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAGTTACATTCGCGGC 363747
| || || || ||| | |||||| | |||| ||| | | |||||| ||
Sbjct 7009 CTGGTGGTATCGGTCTTAATGTCCACAGAATCCGTGCCACTGGA-GCCTACATTGCTGGT 7067
Query 363748 ACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGG 363807
||| ||| |||| || || | ||||| |||||||| || || |||| || || ||
Sbjct 7068 ACAAACGGAAACTCCAACGGAATTGTTCCTATGCTTCGAGTTTTCAACAACACCGCCAGA 7127
Query 363808 TACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCAT 363867
|| || || |||||||| ||||| || || ||||| || || || |||||
Sbjct 7128 TATGTTGATCAGGGTGGTAACAAGCGTCCTGGTGCTTTTGCCATCTACCTTGAGCCATGG 7187
Query 363868 CATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGT 363927
|| || ||| | |||||||| ||||| ||||| || ||| ||||| || || | ||
Sbjct 7188 CACGCTGATGTCTTTGAGTTCCTTGACCTCCGAAAGAACCACGGAAAGGAAGAGGTCCGC 7247
Query 363928 GCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCA 363987
|| |||||||| |||||||| |||||| || | || || |||||||| || ||
Sbjct 7248 GCCCGTGATCTTTTCTATGCTCTTTGGATTCCAGATTTATTCATGAAGCGTGTTGA---- 7303
Query 363988 GGTAAGA------ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTA 364041
|||| | ||| || | | ||||| |||| ||||| ||| | | || ||
Sbjct 7304 --AAAGAACCTTGACTGGACATTGATGTGCCCTAACGAGTGTCCTGGTTTGGCTGACGTT 7361
Query 364042 TGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG 364101
| ||||| || | || ||| | || || || || || | ||| | || ||||||
Sbjct 7362 TACGGTGATGAGTTTGAGGCTTTGTATGAGAAATACGAGGCTGAGAACATGGGCCGTAAG 7421
Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161
|| | || || ||||| |||| | || | || | |||| ||||| |||| |
Sbjct 7422 ACTGTCAAGGCTCAAAAGCTTTGGTACTCTATTCTCGAAGCTCAGACCGAGACCGGAA-A 7480
Query 364162 CCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220
|||| | ||| | ||||| ||| | |||||||| ||| ||||||| || ||||||||||
Sbjct 7481 CCCTTTCATGCTCTACAAGGATGCCTGCAACCGAAAGAGCAACCAGAAGAACCTTGGTAC 7540
Query 364221 AATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279
| || | || |||||| || || |||||| |||| ||| || || || || |
Sbjct 7541 CA-TCCGAAGCTCCAACCTGTGCACGGAGATTGTTGAGTACTGTGCACCAGATGAAGTCG 7599
Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT-----AAAAGA-TGGTACTT 364333
|||| || || | || || | || ||||| | | ||| |||||| | ||||
Sbjct 7600 CCGTTTGCAATTTGGCATCACTTGCTCTTCCAACATATGTTGATGAAAAGACCGCCACTT 7659
Query 364334 TTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCA--ATCTCG-ACAAGG 364390
|||| |||| | ||| | || || || || | | | || | || | | |||
Sbjct 7660 ATGACTTCCAGAAGCTTCACGAGGT---CTGCCAAGTTGTTGTCAAGAACTTGAATAAGA 7716
Query 364391 TTATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGC 364449
|||| || | || || || ||| |||| ||||| || | | ||| | ||||| |
Sbjct 7717 TTATTGATATCAACTACTACCCAGTTCCAGAAGCAAGAAAGAGC-AATTTCCGTCACAGA 7775
Query 364450 CCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTT 364509
|| |||| ||||||||| || || || ||||| | ||| || || | | ||
Sbjct 7776 CCAATTGCTCTTGGTGTTCAAGGTCTTGCTGATGCTTTCTTGGCACTTCGCCTTCCTTTC 7835
Query 364510 GATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCA 364569
|| ||||| || ||| || || | | || ||||| ||||| ||| || ||
Sbjct 7836 GAGTCGCCAGAGGCTAAGCACCTCAACATCCAAATTTTTGAGACAATCTATCACGCTGCT 7895
Query 364570 ATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCC 364629
||||||| || || ||||||| ||| | |||| ||| || ||||| || ||
Sbjct 7896 TTGACTGCATCCGTCGAGCTGGCAAAGACCCATGGAACATACGAGACATATGAAGGCTCA 7955
Query 364630 CCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCT---GTCCGA 364686
||| || |||| | | || | ||| | ||| | || | || || | ||
Sbjct 7956 CCTGCCTCCAAGGGCGAGCTTCAATATGACATGTGG---GGCAAGACACCTACCGACCTT 8012
Query 364687 TGGAACTGGGATACGCTACGTTCCAACGTTAAGA------AGCATGGTACTCGCAAC--- 364737
||| |||||| || ||| | |||| ||| |||||||| |||||||
Sbjct 8013 TGGGACTGGGCTA-GCT-TGAAGCAAC----AGATCGCCCAGCATGGTCTTCGCAACAGT 8066
Query 364738 TCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAG 364797
| |||||| || || ||||| || || ||| || || || || ||||||
Sbjct 8067 TTGCTCGTT---GCTCCTATGCCAACTGCCAGTACCAGTCAAATTCTTGGGTTCAACGAA 8123
Query 364798 TGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCG 364857
|||||||| || | ||| ||| | || || || || |||||| | ||||| || |
Sbjct 8124 TGCTTCGAGCCATATACTTCCAACATCTACTCTCGTCGTGTTCTTGCTGGAGAGTTCCAA 8183
Query 364858 GTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATG 364917
|| || || | || | ||||| ||| || || || ||| ||||| ||||
Sbjct 8184 GTTGTCAACCCATGGCTTCTGAAGGACCTTGTTGATATGGGACTTTGGTCTGACAACATG 8243
Query 364918 AAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGAT 364977
|||||| |||||||| | | ||| || | || || ||||| | |||| |||
Sbjct 8244 AAGAACCGAATCATCGCTGATGGTGGATCAATCCAAAATGTTCCAAACATCCCAGCTGAT 8303
Query 364978 CTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCG 365037
| ||| || ||||||| || || ||||| || || || ||| || | | |||||
Sbjct 8304 ATCAAGGCTCTTTACAAGACTGTTTGGGAGATCTCACAACGTACTATCGTCCAGATGGCT 8363
Query 365038 GCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCA 365097
|| ||||| ||||| || || ||| || || | ||| | ||||| | |||
Sbjct 8364 GCTGATCGTGGTGCATTCATTGATCAATCTCAATCAATGAACATCCACATGAAGGACCCA 8423
Query 365098 ACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
||| | ||| | || ||||||||| || ||||| | ||||| ||||| ||
Sbjct 8424 ACCATGGGTAAGATCACCAGTATGCATTTCGCAGGTTGGAAGTTGGGTCTCAAGACTGG 8482
>seq678
Length=9679
Score = 125 bits (138), Expect = 2e-23
Identities = 350/531 (66%), Gaps = 16/531 (3%)
Strand=Plus/Plus
Query 22432 ATTAAGAATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCG 22488
|| ||||| ||||| |||||||| | ||||| | |||| || | | || ||
Sbjct 7923 ATCAAGAAGAAGGCCGATTGGGCTGTTCGTTGGATCCAGGACAAGGAGTCTACCTTTGCT 7982
Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548
|||||||| |||| ||||||| ||||| || || |||||| ||| | || |
Sbjct 7983 CAACGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTTAGTGGCTCTTTCGCATCC 8042
Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608
||||||||| | || || |||| ||||| | ||||| || || || || ||||| ||
Sbjct 8043 ATCTTTTGGTTGAAGAAGCGTGGTCTTATGGCTGGTCTTACTTTCTCCAACGAGTTGATC 8102
Query 22609 AGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATT 22668
||| || |||||||| || ||||||||||| || | || | || || ||| |
Sbjct 8103 TCCCGTGACGAGGGTCTCCACACCGATTTTGCATGCCTCCTCT-TC----TCCCATC--T 8155
Query 22669 CATAAACTTCCATATGAA----ACTGTACTTGATATTATTACAAATGCAGTTGAACTTGA 22724
|| || || | || |||| | | | | || || | || ||||| ||||
Sbjct 8156 CAAGCACCGCCCAAGCAAGGCTGCTGTCCAAGCTGTCATCACTGAGGCTGTTGAGATTGA 8215
Query 22725 ACGTCTATTTATTTGC-GAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAA 22783
| | || || | ||||| | || |||| ||||||| || || | | |
Sbjct 8216 GC-AGGAGTTCTTGACTGAGGCTCTTCCTTGTGCTCTCCTTGGTATGAACGCTGGCTTGA 8274
Query 22784 TGAGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGC 22843
||| ||| || | || ||||| ||||| || | |||| ||||| ||| |||
Sbjct 8275 TGAAGCAATACATCGAGTTCGTTGCTGATCGCCTTCTCCTTTCCCTCGGCAATGAGAAGG 8334
Query 22844 ATTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCA 22903
||| || || | || ||||| || | ||||| || || |||| ||||||||||
Sbjct 8335 TTTACAAGGTTGCCAACCCATTCGACTTCATGGAGAACATCTCTCTTGCCGGAAAGACCA 8394
Query 22904 ATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGATG 22954
| |||||||| || | |||| ||| |||||||| || ||||| |||| ||
Sbjct 8395 ACTTCTTCGAGAAGCGTGTTGCTGATTACCAAAAGGCCGGTGTCATGGCTG 8445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303274295413718
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