Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq4739 113 4e-20
>seq4739
Length=56954
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
||||||| ||| || |||||||||||||| ||||||||||||| || |||| | | |||
Sbjct 21118 AGTACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGGCCATCC 21059
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | ||| ||||| || |||| || |||||||| || || | ||||| |||||
Sbjct 21058 TCAAGTTGCTTGCCTGCGAAAATGAGTCGCTGTTGATCAGGTGGGATACCCTCCTTGTCT 20999
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | |||||| | | | | ||| ||| || || ||||| ||||| ||
Sbjct 20998 TGGATCTTGGACTTCACATTGTCGATAGTATCGGAGGATTCAACTTCCAAAGTGATTGTC 20939
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| |||| || || || || ||||||||
Sbjct 20938 TTTCCAGTCAAGGTCTTAACGAAGATCTGCAT 20907
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405064554139510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |