Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq678 98.7 1e-15
>seq678
Length=9679
Score = 98.7 bits (108), Expect = 1e-15
Identities = 157/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| ||||| ||||| || | ||| ||||| || || |||||||| ||| ||| || |
Sbjct 8138 GCATGCAAAATCGGTGTGGAGACCCTCGTCACGGGAGATCAACTCGTTGGAGAAAGTAAG 8079
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
||| | | || || || ||||| | |||||| || || || ||| ||| ||| ||
Sbjct 8078 ACCAGCCATAAGACCACGCTTCTTCAACCAAAAGATGGATGCGAAAGAGCCACTAAAGAA 8019
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270
||||| || || || ||||| || |||| ||||| ||||| | | || | ||
Sbjct 8018 GATACCCTCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAAGGTAGACTCCTTG-TCCT 7960
Query 93271 G-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGG 93312
| ||||| | |||||||||||| || ||||| || |||||
Sbjct 7959 GGATCCAACGAACAGCCCAATCGGCCTTCTTCTTGATGCAAGG 7917
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556827743350760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |