Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq4538 156 8e-33
>seq4538
Length=19519
Score = 156 bits (172), Expect = 8e-33
Identities = 472/723 (65%), Gaps = 12/723 (2%)
Strand=Plus/Minus
Query 244723 GTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATT 244782
||||| |||||||| ||||| ||||| || |||||| || |||| || || ||
Sbjct 7580 GTACTCAACAATCTCCGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTCTGGTT 7521
Query 244783 GGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGC 244842
| ||| ||||||||| ||||||||||||||||| || ||||||||| ||| ||
Sbjct 7520 GCTCTTTCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCGGTCTGAGC 7461
Query 244843 GACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGC 244902
|||| | || ||| || | ||||||||| ||| | || || || ||| ||
Sbjct 7460 TTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTGACAGTCTTACGGCCCATGTTCTCAGC 7401
Query 244903 CTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA 244962
|||||| |||| ||||| ||||| || | || || | | || || ||
Sbjct 7400 CTCGTATTTCTCATACAAAGCCTCAAACTCATCACCGTAAACGTCAGCCAAACCAGGACA 7341
Query 244963 CGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTC 245022
| |||||||| | |||| || | | | || | || |||||| | ||
Sbjct 7340 CTCGTTAGGGCACATCAATGTCCAGTCAAGGTTCTTTTCAACACGCTTCATGAATAAATC 7281
Query 245023 GGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTT 245082
|| ||||| || || | ||| || || | || | ||| ||| || ||||||
Sbjct 7280 TGGAATCCAAAGAGCATAGAAAAGATCACGGGCGCGGACCTCTTCCTTTCCGTGGTTCTT 7221
Query 245083 CCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGC 245142
| || || | || |||||||| || ||||||| ||||| | ||||| || | ||
Sbjct 7220 TCGGAGGTCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAAGC 7161
Query 245143 GCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAG 245202
|| || |||||||| || ||||| || || || || |||||| | || ||
Sbjct 7160 ACCAGGACGCTTGTTACCACCCTGATCAACATATCTGGCGGTGTTGTTGAAAACTCGAAG 7101
Query 245203 GGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCT 245262
|||| || || ||||| |||| ||||| || || |||||||| || || | |
Sbjct 7100 CATAGGAACAATTCCGTTGGAGTTTCCGTTTGTACCAGCAATGTAGGCTCCAGTGGCACG 7041
Query 245263 GAGGTTGCTGATGGACATG----CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGC 245318
|| | ||| ||||||| || | || || |||| ||| || || | |||||
Sbjct 7040 GA---TTCTG-TGGACATTAAGACCGATACCACCAGCGTTCTTAGAAATCATAGCGCAAG 6985
Query 245319 TCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGG 245378
|||| | ||||| || || || ||||||||| |||||||| || || || || |
Sbjct 6984 TCTTCAAAGTGTCATAAATACCATCAATGCTGTCCTCCTTCATGTCGATGAGGAAACATG 6925
Query 245379 AGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTG--GGGCTGGCGTGGGTAAA 245436
| || || || | |||| || | || || | | | |||| || ||||||||||||
Sbjct 6924 ATGAGAGTTGTG-CTTGTGGA-GTACCAGCAGCAAAAAGTGTTGGAGAGGCGTGGGTAAA 6867
Query 245437 GTA 245439
|||
Sbjct 6866 GTA 6864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944283141664240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |