Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq678 93.3 9e-14
>seq678
Length=9679
Score = 93.3 bits (102), Expect = 9e-14
Identities = 162/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 243503 TCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGC 243562
||||||| || || ||||| | || |||| ||| | || ||| |||| || |
Sbjct 8191 TCATCACTGAGGCTGTTGAGATTGAGCAGGAGTTCTTGACTGAGGCTCTTCCTTGTGCTC 8250
Query 243563 TTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTT 243622
| |||| |||||| ||| | ||| || |||||||| ||||| || || ||| ||
Sbjct 8251 TCCTTGGTATGAACGCTGGCTTGATGAAGCAATACATCGAGTTCGTTGCTGATCGCCTTC 8310
Query 243623 TCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGC 243682
|| | | || || ||||||| || ||||| ||||| || | ||| ||||||
Sbjct 8311 TCCTTTCCCTCGGCAATGAGAAGGTTTACAAGGTTGCCAACCCATTCGACTTCATGGAGA 8370
Query 243683 TCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAA 243738
||| || ||| || || || ||||||||||| |||||||| |||||| |||
Sbjct 8371 ACATCTCTCTTGCCGGAAAGACCAACTTCTTCGAGAAGCGTGTTGCTGATTACCAA 8426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102812893543150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |