Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq4538 196 6e-45
seq678 95.1 1e-14
>seq4538
Length=19519
Score = 196 bits (216), Expect = 6e-45
Identities = 1113/1756 (63%), Gaps = 49/1756 (3%)
Strand=Plus/Minus
Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 113647
||| | | |||||| |||||||| || |||||||| ||| |||||| | | ||||
Sbjct 8506 GCCATGGTTCGGAGATAGTACATTCCAGTCTTGAGACCCAACTTCCAACCTGCGAAATGC 8447
Query 113648 ATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 113707
|| || | ||| | ||||| | |||| || |||||| ||| ||||||
Sbjct 8446 ATACTGGTGATCTTACCCATGGTTGGGTCCTTCATGTGGATGTTCATTGATTGAGATTGA 8387
Query 113708 TCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCA 113766
|| ||||| |||||||| || ||||| | | | | | | | | ||| |||||
Sbjct 8386 TCAATGAATGCACCACGATCAGCAGCCATCTGGACGATAGTACGTTGTGA-GATCTCCCA 8328
Query 113767 CACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCC 113826
||||| |||| || ||| |||||| ||||||| | | ||||||||| || ||
Sbjct 8327 AACAGTCTTGTAAAGAGCCTTGATATCAGCTGGGATGTTTGGAACATTTTGGATTGATCC 8268
Query 113827 ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATC 113886
||| | || || | | |||||| | | ||||| || || || | || ||
Sbjct 8267 ACCATCAGCGATGATTCGGTTCTTCATGTTGTCAGACCAAAGTCCCATATCAACAAGGTC 8208
Query 113887 CTCCACGAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TA 113943
|| || || ||| | ||||||| ||||| || || || || | ||| ||
Sbjct 8207 CTTCAGAAGCCATGGGT--TGACAACTTGGAACTCTCCAGCAAGAACACGACG-AGAGTA 8151
Query 113944 GATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGC-GGTGGAGG 114002
||| |||| || |||||||| ||||| || ||| |||||||| || | | ||| ||
Sbjct 8150 GATGTTGGAAGTATATGGCTCGAAGCATTCGTTGA-ACCCAAGAATTTGACTGGTACTGG 8092
Query 114003 CTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCT 114062
| || ||||| || || | ||| | ||||| || ||||| | | || ||| ||
Sbjct 8091 CAGTTGGCATAGGAGCAACGAGCAAACTGTTGCGAAGACCATGCTGGGCGATCTGTTGCT 8032
Query 114063 TGAGGGCGTCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 114119
| | | ||||||| | || | ||||| ||| ||||| ||| | || |
Sbjct 8031 TCAAGCTAGCCCAGTCCCAAAGGTCGGTAGGTGTCTTGCCC---CACATGTCATATTGAA 7975
Query 114120 GGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCA 114179
| || | |||||| || || || ||| |||||||||||| || | || ||||
Sbjct 7974 GCTCGCCCTTGGAGGCAGGTGAGCCTTCATATGTCTCGTATGTTCCATGGGTCTTTGCCA 7915
Query 114180 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTG 114239
||| | || | || |||||||| |||||||||||||| | || |
Sbjct 7914 GCTCGACGGATGCAGTCAAAGCAGCGTGATAGATTGTCTCAAAAATTTGGATGTTGAGGT 7855
Query 114240 CCTTGGCCTCGTCGGAATCAAACGCGAGTCG--GCACAAAATAAATACATCCGCGAGACC 114297
||| ||||| || || || | || || | | || || |||| || |||||
Sbjct 7854 GCTTAGCCTCTGGCGACTCGAAAGGAAGGCGAAGTGCCAAGAAAG--CATCAGCAAGACC 7797
Query 114298 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGG 114356
||| ||||| || ||||||| | || | | ||| ||||| || ||| | | |
Sbjct 7796 TTGAACACCAAGAGCAATTGGTCTGTGACGGAAATTGCTCTTTCTTGCT-TCTGGAACTG 7738
Query 114357 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 114416
| || | || |||| |||| | |||| | || ||| ||||| | || || |
Sbjct 7737 GGTAGTAGTTGATATCAATAATCTTATTCAAGTTCTTGACAACAACTTGGCAGACCTCGT 7678
Query 114417 GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTG 114476
||||||| | | | ||| || || |||| ||||| ||||| | ||||| || | ||
Sbjct 7677 GAAGCTTCTGGAAGTCATAAGTGGCGGTCTTTTCATCAACATATGTTGGAAGAGCAAGTG 7618
Query 114477 ACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACA 114536
| |||| ||| || || | | ||||| || |||||| | ||| ||||| ||||
Sbjct 7617 ATGCCAAATTGCAAACGGCGACTTCATCTGGTGCACAGTACTCAACAATCTCCGTGCACA 7558
Query 114537 AATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCT 114596
|| || || ||||| || | |||||| || || |||| ||| || |||||||
Sbjct 7557 GGTTGGAGCTTCGGATGGTACCAAGGTTCTTCTGGTTGCTCTTTCGGTTGCAGGCATCCT 7498
Query 114597 TGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CA 114655
|||| |||||| | || | || ||||| || || | | |||||||| | ||| | |
Sbjct 7497 TGTAGAGCATGAAAGGGTTTCCGGTCTCGGTCTGAGCTTCGAGAATAGAGTACCAAAGCT 7438
Query 114656 TCGGCGGCTGGCACAGTGGCGTTGGCTCGCCC-----CTCCTCCTCGTACTTTGTGTAGA 114710
| | | || | ||||| | | | |||| ||| ||||||| || || |
Sbjct 7437 TTTGAGCCTTG-ACAGT--CTTACG---GCCCATGTTCTCAGCCTCGTATTTCTCATACA 7384
Query 114711 GGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGA 114770
|| |||||||| ||||| | || | | || || || | ||||| | |
Sbjct 7383 AAGCCTCAAACTCATCACCGTAAACGTCAGCCAAACCAGGACACTCGTTAGGGCACATCA 7324
Query 114771 GAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTG 114830
| ||| | | || ||||||||||||||||| | ||||| ||||| |||||
Sbjct 7323 ATGTCCAGTCAAGGTTCTTTTCAACACGCTTCATGAATAAATCTGGAATCCAAAGAGCAT 7264
Query 114831 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 114890
|||| ||||| || ||| | ||||| | || || || || | || | || |
Sbjct 7263 AGAAAAGATCACGGGCGCGGACCTCTTCCTTTCCGTGGTTCTTTCGGAGGTCAAGGAACT 7204
Query 114891 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG----- 114945
| | || ||| |||||||| || || ||||| | || | | || | ||||
Sbjct 7203 CAAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAAGCACC---AGGACGCTTGT 7147
Query 114946 -ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATAC 115004
|||| |||| | ||||| || || ||| || || || |||||||| |||| || |
Sbjct 7146 TACCACCCTGATCAACATATCTGGCGGTGTTGTTGAAAACTCGAAGCATAGGAACAATTC 7087
Query 115005 CATCAGATTGGCCATTTGTCCCCCGAATACGAGACT-TATTGGCTCTGACATCATGGATG 115063
| | || | || ||||| || ||| || || | |||| | || ||||
Sbjct 7086 CGTTGGAGTTTCCGTTTGTACCAGCAAT-GTAGGCTCCAGTGGCACGGATTCTGTGGACA 7028
Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123
| | ||| ||||| || || ||| || || ||||| | | | | || | ||
Sbjct 7027 TTAAGACCGATACCACCAGCGTTCTTAGAAATCATAGCGCAAGTCTTCAAAGTGTCATAA 6968
Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183
|| || || || ||| |||| | |||| ||||| || || | ||||| |
Sbjct 6967 ATACCATCAATGCTGTCCTCCTTCATGTCGATGAGGAAACATGATGAGAGTTGTGCTTGT 6908
Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCT 115241
|| |||||||| || || ||||| | |||||| | || || ||| |||||||
Sbjct 6907 GGAGTACCAGCAGCAAAAAGTGTTGGAGAGGCGTGGGT-AAAGTA-TTTGCTGGACATCA 6850
Query 115242 TATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCA 115301
| ||||||||| | | | || ||| | || ||||||||||| | | || ||||
Sbjct 6849 AGTTGTAGGTCTCAATGGCAGCCTCAATATTATCACCGTGAATACCAACAGCAACACGCA 6790
Query 115302 TAAACATGTATTGGGG 115317
||| ||| | ||| ||
Sbjct 6789 TAATCATATGTTGTGG 6774
>seq678
Length=9679
Score = 95.1 bits (104), Expect = 1e-14
Identities = 117/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106
||||| || |||||||||||||||||||||||| | || || ||||| || ||
Sbjct 8134 GCAAAATCGGTGTGGAGACCCTCGTCACGGGAGATCAACTCGTTGGAGAAAGTAAGACCA 8075
Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166
| ||| ||||| |||||||||||||| || || | || || || ||||||||
Sbjct 8074 GCCATAAGACCACGCTTCTTCAACCAAAAGATGGATGCGAAAGAGCCACTAAAGAAGATA 8015
Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206
||||| ||| || || |||| ||||| | ||||||||
Sbjct 8014 CCCTCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAAGG 7975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597318139596920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |