Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq4739 82.4 8e-11
>seq4739
Length=56954
Score = 82.4 bits (90), Expect = 8e-11
Identities = 123/175 (70%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || |||||||||||||| | | ||| || |||| || ||||||||||||
Sbjct 20592 GTAGACTCCTTCTGAATGTTGTAATCGGAAAGGGTACGACCGTCCTCGAGCTGCTTGCCG 20533
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || | || || ||||| |||||||| ||||| || || || || || |||
Sbjct 20532 GCGAAGATCAAGCGTTGTTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGACTTG 20473
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCA 64421
|| || | |||||| | || ||||| | ||| | ||||| || ||||
Sbjct 20472 ACGTTGTCGATGGTATCAGAAGACTCTACTTCGAGAGTAATAGTCTTACCAGTCA 20418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499615139835560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |