Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10- 27] 4,749 sequences; 51,524,987 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq4739 82.4 8e-11 >seq4739 Length=56954 Score = 82.4 bits (90), Expect = 8e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || |||||||||||||| | | ||| || |||| || |||||||||||| Sbjct 20592 GTAGACTCCTTCTGAATGTTGTAATCGGAAAGGGTACGACCGTCCTCGAGCTGCTTGCCG 20533 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || | || || ||||| |||||||| ||||| || || || || || ||| Sbjct 20532 GCGAAGATCAAGCGTTGTTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGACTTG 20473 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCA 64421 || || | |||||| | || ||||| | ||| | ||||| || |||| Sbjct 20472 ACGTTGTCGATGGTATCAGAAGACTCTACTTCGAGAGTAATAGTCTTACCAGTCA 20418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499615139835560