Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq4538 154 1e-32
>seq4538
Length=19519
Score = 154 bits (170), Expect = 1e-32
Identities = 382/576 (66%), Gaps = 4/576 (1%)
Strand=Plus/Plus
Query 94022 ACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCG 94081
|||| || || ||||| | | ||||||| | ||||||| || ||||||| |
Sbjct 7006 ACGCTGGTGGTATCGGTCTTAATGTCCACAGAATCCGTGCCACTGGAGCCTACATTGCTG 7065
Query 94082 GTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGC 94141
|||| || || | ||||||||| | || |||||||| || || ||||||||| | ||
Sbjct 7066 GTACAAACGGAAACTCCAACGGAATTGTTCCTATGCTTCGAGTTTTCAACAACACCGCCA 7125
Query 94142 GCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCT 94201
| || || || ||||||||| | | | ||| |||| || |||| || ||||| |
Sbjct 7126 GATATGTTGATCAGGGTGGTAACAAGCGTCCTGGTGCTTTTGCCATCTACCTTGAGCCAT 7185
Query 94202 GGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA 94261
||||||| || || | ||| | ||||| |||||||||||||| || || ||
Sbjct 7186 GGCACGCTGATGTCTTTGAGTTCCTTGACCTCCGAAAGAACCACGGAAAGGAAGAGGTCC 7245
Query 94262 GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGA 94321
| ||| | || || ||||| ||||| ||| | ||||| | || ||||| || || || |
Sbjct 7246 GCGCCCGTGATCTTTTCTATGCTCTTTGGATTCCAGATTTATTCATGAAGCGTGTTGAAA 7305
Query 94322 AAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTT--G 94379
| ||| | ||||| | | || || || || ||||| || || | ||||||| |
Sbjct 7306 AGAACCTTGACTGGACATTGATGTGCCCTAACGAGTGTCCTGGTTTGGCTGACGTTTACG 7365
Query 94380 TGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGT 94439
||| | | ||||| | ||||||| ||||| | || || || | | |||
Sbjct 7366 GTGAT-GAG-TTTGAGGCTTTGTATGAGAAATACGAGGCTGAGAACATGGGCCGTAAGAC 7423
Query 94440 TATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCC 94499
| | | ||| ||||| ||| | || | || | ||| ||||| || | ||
Sbjct 7424 TGTCAAGGCTCAAAAGCTTTGGTACTCTATTCTCGAAGCTCAGACCGAGACCGGAAACCC 7483
Query 94500 CTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGAT 94559
| ||| | | |||||| | |||| ||| ||||||| || |||| || ||
Sbjct 7484 TTTCATGCTCTACAAGGATGCCTGCAACCGAAAGAGCAACCAGAAGAACCTTGGTACCAT 7543
Query 94560 CAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTA 94595
| ||||| || |||||||| |||||||| |||||
Sbjct 7544 CCGAAGCTCCAACCTGTGCACGGAGATTGTTGAGTA 7579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494693831994040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |