Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10- 27] 4,749 sequences; 51,524,987 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq678 109 9e-19 >seq678 Length=9679 Score = 109 bits (120), Expect = 9e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || |||||||| ||||| ||| ||| || |||||||| || ||||| ||||||||||| Sbjct 8146 AAGAGGAGGCATGCAAAATCGGTGTGGAGACCCTCGTCACGGGAGATCAACTCGTTGGAG 8087 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | || || | ||| | |||||| || | |||||| |||| || |||| || Sbjct 8086 AAAGTAAGACCAGCCATAAGACCACGCTTCTTCAACCAAAAGATGGATGCGAAAGAGCCA 8027 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 ||||| ||||| ||||| || || ||||| || || || | | | |||| | | | Sbjct 8026 CTAAAGAAGATACCCTCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAAGGTAGACTCC 7967 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGG 160143 |||| ||| |||| | ||||| || |||||||| |||||| || Sbjct 7966 TTGTCCTGGATCCAACGAACAGCCCAATCGGCCTTCTTCTTGATGCAAGG 7917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795107997599440