Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq4538 293 3e-74
seq678 91.5 2e-13
>seq4538
Length=19519
Score = 293 bits (324), Expect = 3e-74
Identities = 1183/1826 (65%), Gaps = 57/1826 (3%)
Strand=Plus/Minus
Query 105581 GCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGC 105640
||| | | ||||||||||||||| || |||||||| || ||||| | | ||||
Sbjct 8506 GCCATGGTTCGGAGATAGTACATTCCAGTCTTGAGACCCAACTTCCAACCTGCGAAATGC 8447
Query 105641 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGG 105700
||| | || ||| ||| ||||| | |||| | ||||| |||| ||
Sbjct 8446 ATACTGGTGATCTTACCCATGGTTGGGTCCTTCATGTGGATGTTCATTGATTGAGATTGA 8387
Query 105701 TCAATGAAGCGACCACGTTGTGCCGCCATATCAATGACA-TCCTTCATCTTGATTTCCCA 105759
|||||||| |||||| | || ||||| | | || | | | | | ||| |||||
Sbjct 8386 TCAATGAATGCACCACGATCAGCAGCCATCTGGACGATAGTACGTTGTGA-GATCTCCCA 8328
Query 105760 CACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACC 105819
|| || ||| ||| |||||||||| ||||||| | || | |||||| ||||| ||
Sbjct 8327 AACAGTCTTGTAAAGAGCCTTGATATCAGCTGGGATGTTTGGAACATTTTGGATTGATCC 8268
Query 105820 CCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATC 105879
|| | || || | | |||||| | | |||||||| || || | || ||
Sbjct 8267 ACCATCAGCGATGATTCGGTTCTTCATGTTGTCAGACCAAAGTCCCATATCAACAAGGTC 8208
Query 105880 ATTGACGAG--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TA 105936
|| | || ||| |||||||| |||||||| || || | | ||| ||
Sbjct 8207 CTTCAGAAGCCATGG--GTTGACAACTTGGAACTCTCCAGCAAGAACACGACG-AGAGTA 8151
Query 105937 GATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAGG 105995
|||||| | || || || || |||||||| || |||||||| |||| ||| ||
Sbjct 8150 GATGTTGGAAGTATATGGCTCGAAGCATTCGTTGA-ACCCAAGAATTTGACTGGTACTGG 8092
Query 105996 CTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCT 106055
| |||||||| || || | | | |||||| |||||||| | | ||| ||| ||
Sbjct 8091 CAGTTGGCATAGGAGCAACGAGCAAACTGTTGCGAAGACCATGCTGGGCGATCTGTTGCT 8032
Query 106056 TGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTT--CCCACATATCAAATTGAA 106112
| | | ||||||| | | | | ||| || || ||||||| ||| ||||||
Sbjct 8031 TCAAGCTAGCCCAGTCCCAAAGGTCGGTAGGTGTC---TTGCCCCACATGTCATATTGAA 7975
Query 106113 GCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCA 106172
|| | || | ||| | || || || ||| ||||||| || | || |||| | ||||
Sbjct 7974 GCTCGCCCTTGGAGGCAGGTGAGCCTTCATATGTCTCGTATGTTCCATGGGTCTTTGCCA 7915
Query 106173 ATTC-ACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 106231
|| || | | || | | | |||||||| || || ||||| || | || |
Sbjct 7914 GCTCGACGGATGCAGTCAAAGCA-GCGTGATAGATTGTCTCAAAAATTTGGATGTTGAGG 7856
Query 106232 TCCTTGGCTTCATCTGAATCAAATG-----CGTAGCGGCACAAAATAAATACATCCGCGA 106286
| ||| || || || || || | || || | || ||| |||| || |
Sbjct 7855 TGCTTAGCCTCTGGCGACTCGAAAGGAAGGCGAAGTGCCAAGAAAG-----CATCAGCAA 7801
Query 106287 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC-A 106345
||||||||||||| | | |||| |||||||| || | ||| ||||| || ||| |
Sbjct 7800 GACCTTGAACACCAAGAGCAATTGGTCTGTGACGGAAATTGCTCTTTCTTGCT-TCTGGA 7742
Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT-GAT 106404
|| || || | || | ||||| | || | || ||| ||||| ||| | ||
Sbjct 7741 ACTGGGTAGTAGTTGATATCAATAATCTTATTCAAGTTCTTGACAACAA-CTTGGCAGAC 7683
Query 106405 TTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGC 106464
|| ||||| || | | ||| ||||| |||| ||||| ||||| ||||||| ||
Sbjct 7682 CTCGTGAAGCTTCTGGAAGTCATAAGTGGCGGTCTTTTCATCAACATATGTTGGAAGAGC 7623
Query 106465 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 106524
| |||||||||||||||||| || ||||| | |||||| | ||| || ||
Sbjct 7622 AAGTGATGCCAAATTGCAAACGGCGACTTCATCTGGTGCACAGTACTCAACAATCTCCGT 7563
Query 106525 ACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGC 106584
|||| |||||| || || || || | ||||| ||||| |||||| |||||| ||
Sbjct 7562 GCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTCTGGTTGCTCTTTCGGTTGCAGGC 7503
Query 106585 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644
|||||||||||||||| | || | || ||||| ||||| | | |||||| | | |||
Sbjct 7502 ATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCGGTCTGAGCTTCGAGAATAGAGTACCA 7443
Query 106645 CA-CATCGGCGGCTGGTACAATGGCGT-TGGCCCGT-CCCTCCGCCTCGTACTTTGTGTA 106701
| | | | | || | ||| | | | ||||| | ||| |||||||| || ||
Sbjct 7442 AAGCTTTTGAGCCTTG-ACA--GTCTTACGGCCCATGTTCTCAGCCTCGTATTTCTCATA 7386
Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 106761
| || |||||||| ||||| |||| | | ||| || || || || || |
Sbjct 7385 CAAAGCCTCAAACTCATCACCGTAAACGTCAGCCAAACCAGGACACTCGTTAGGGCACAT 7326
Query 106762 AAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 106821
| | ||| | | || ||||| ||||||||||| | ||||||||||| || |
Sbjct 7325 CAATGTCCAGTCAAGGTTCTTTTCAACACGCTTCATGAATAAATCTGGAATCCAAAGAGC 7266
Query 106822 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 106881
| || ||||| | || ||||||| | || ||||| ||| | ||||||||
Sbjct 7265 ATAGAAAAGATCACGGGCGCGGACCTCTTCCTTTCCGTGGTTCTTTCGGAGGTCAAGGAA 7206
Query 106882 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC-- 106939
||| | || ||| ||||||||||||||||| |||| || | || || |||||
Sbjct 7205 CTCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAAGCACC---AGGACGCTT 7149
Query 106940 ----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 106995
||| | |||| ||||| | || ||| ||| || || |||||||| |||| |||
Sbjct 7148 GTTACCACCCTGATCAACATATCTGGCGGTGTTGTTGAAAACTCGAAGCATAGGAACAAT 7089
Query 106996 ACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT 107055
|| | || | || ||||| || ||| | | | |||| | | ||||
Sbjct 7088 TCCGTTGGAGTTTCCGTTTGTACCAGCAATGTAGGCTCCAGTGGCACGGATTCTGTGGAC 7029
Query 107056 GTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCA 107113
| | || ||||| ||||| ||| || || | ||||| | | | | | ||| ||
Sbjct 7028 ATTAAGACCGATACCACCAGCGTTCTTAGAAATCATAGCGCA-AGT-CTTCAAAGTGTCA 6971
Query 107114 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 107173
|| ||||| | || ||||||||| || |||| ||||| || || | || | |
Sbjct 6970 TAAATACCATCAATGCTGTCCTCCTTCATGTCGATGAGGAAACATGATGAGAGTTGTGCT 6911
Query 107174 CTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACA 107231
||| ||||||||| || || ||||| | ||||| | || || ||| |||||
Sbjct 6910 TGTGGAGTACCAGCAGCAAAAAGTGTTGGAGAGGCGTGGGT-AAAGTA-TTTGCTGGACA 6853
Query 107232 TCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACAC 107291
|| || ||| ||||| | | ||| ||||| | || ||||| || || | || ||||
Sbjct 6852 TCAAGTTGTAGGTCTCAATGGCAGCCTCAATATTATCACCGTGAATACCAACAGCAACAC 6793
Query 107292 GCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTC 107350
|||||| ||| | ||| || ||| | |||||||||| || | ||||| | ||
Sbjct 6792 GCATAATCATATGTTGTGGACGTTCGCAAATCTTGCCATCGAGACGGAGGAGATATGATC 6733
Query 107351 TTCTCAAGGGTTTTGAGACCAAAGTA 107376
||| ||||| |||| || |||||
Sbjct 6732 -GCTCGAGGGTCTTGAATCCGAAGTA 6708
>seq678
Length=9679
Score = 91.5 bits (100), Expect = 2e-13
Identities = 287/442 (65%), Gaps = 2/442 (0%)
Strand=Plus/Minus
Query 116993 CAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAA 117052
|||| |||||||| |||||||||||||| || |||| ||||| ||||| ||||| |
Sbjct 8415 CAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGAGAGATGTTCTCCATGAAGTCGA 8356
Query 117053 ATGGATTCTTCGCGTTCCAAATGGGTGGCACC-CCAACTTGTTTGAGGAGACGATCCGAC 117111
|||| || | || ||| | || || | ||| || ||||| |
Sbjct 8355 ATGGGTTGGCAACCTTGTAAACCT-TCTCATTGCCGAGGGAAAGGAGAAGGCGATCAGCA 8297
Query 117112 ACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACATGGGAGT 117171
|| |||| ||||| | |||| ||| ||||||||| | |||| ||| || ||
Sbjct 8296 ACGAACTCGATGTATTGCTTCATCAAGCCAGCGTTCATACCAAGGAGAGCACAAGGAAGA 8237
Query 117172 GCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGATAGTT 117231
|| || | |||| | | |||||||||||| ||||| | | || || |||| ||
Sbjct 8236 GCCTCAGTCAAGAACTCCTGCTCAATCTCAACAGCCTCAGTGATGACAGCTTGGACAGCA 8177
Query 117232 TCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCTGGTGGAGA 117291
| | | || | | | | |||||| ||||| || |||||||
Sbjct 8176 GCCTTGCTTGGGCGGTGCTTGAGATGGGAGAAGAGGAGGCATGCAAAATCGGTGTGGAGA 8117
Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351
||||| || ||||| || | || || ||||| || || | ||| ||||| ||||||
Sbjct 8116 CCCTCGTCACGGGAGATCAACTCGTTGGAGAAAGTAAGACCAGCCATAAGACCACGCTTC 8057
Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411
||||||||| | || | ||| || || |||||||||||||| ||| |||||
Sbjct 8056 TTCAACCAAAAGATGGATGCGAAAGAGCCACTAAAGAAGATACCCTCAACAGCAGCAAAG 7997
Query 117412 GCAAAAAGGCGCTCGGCGAAGG 117433
|||| ||| || | || ||||
Sbjct 7996 GCAACAAGACGTTGAGCAAAGG 7975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589945777264760
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