Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10- 27] 4,749 sequences; 51,524,987 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq4384 136 5e-27 >seq4384 Length=63329 Score = 136 bits (150), Expect = 5e-27 Identities = 187/257 (73%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA-GACAGATATG 159605 || ||||| |||||||| || || |||||| ||||| || | ||| | | | || Sbjct 61316 ATCATGATCACATATCCTTCCACCTTTGGTGTTTTTGAGCCAGAGGTCAAGGCTGCC-TG 61374 Query 159606 TAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACA 159665 | | | |||||| | ||||||| ||||| || | |||||||| || | ||||| || Sbjct 61375 TGATTTGGTTCATCAACATGGTGGGCAGGTTTACATGGATGGTGCGAACATGAATGCTCA 61434 Query 159666 GGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAA 159725 | | || | ||| |||| |||||| ||||| |||||||| ||| | ||||| Sbjct 61435 GATTGGATTGTGCTCACCTGGTGAGATTGGTGCTGATGTCTGTCATCTCAACCTTCATAA 61494 Query 159726 GACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAA- 159784 |||||| |||||||| ||||| |||||||| || || || ||||| |||||||| ||| Sbjct 61495 GACATTTTGTATTCCTCATGGTGGTGGAGGACCAGGTGTTGGTCCAATTGGTGT--CAAG 61552 Query 159785 -AACATCTCACACCATT 159800 ||||||| ||||||| Sbjct 61553 TCACATCTCGCACCATT 61569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588016291810640