Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq4384 136 5e-27
>seq4384
Length=63329
Score = 136 bits (150), Expect = 5e-27
Identities = 187/257 (73%), Gaps = 6/257 (2%)
Strand=Plus/Plus
Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA-GACAGATATG 159605
|| ||||| |||||||| || || |||||| ||||| || | ||| | | | ||
Sbjct 61316 ATCATGATCACATATCCTTCCACCTTTGGTGTTTTTGAGCCAGAGGTCAAGGCTGCC-TG 61374
Query 159606 TAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACA 159665
| | | |||||| | ||||||| ||||| || | |||||||| || | ||||| ||
Sbjct 61375 TGATTTGGTTCATCAACATGGTGGGCAGGTTTACATGGATGGTGCGAACATGAATGCTCA 61434
Query 159666 GGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAA 159725
| | || | ||| |||| |||||| ||||| |||||||| ||| | |||||
Sbjct 61435 GATTGGATTGTGCTCACCTGGTGAGATTGGTGCTGATGTCTGTCATCTCAACCTTCATAA 61494
Query 159726 GACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAA- 159784
|||||| |||||||| ||||| |||||||| || || || ||||| |||||||| |||
Sbjct 61495 GACATTTTGTATTCCTCATGGTGGTGGAGGACCAGGTGTTGGTCCAATTGGTGT--CAAG 61552
Query 159785 -AACATCTCACACCATT 159800
||||||| |||||||
Sbjct 61553 TCACATCTCGCACCATT 61569
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588016291810640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |