Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq4739 87.8 1e-12
>seq4739
Length=56954
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/214 (70%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||||| || || |||||||| ||||| |||| | || |||| |||
Sbjct 21343 ACCAAGTGCAGGGTGCTCTCCTTTTGAATGTTGTAGTCGCTAAGGGTACGACCATCCTCC 21284
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
| || || || || || || | ||| || |||||| | || | |||||||| ||
Sbjct 21283 AATTGCTTACCAGCGAAAATCAATCGCTGTTGGTCTGGTGGAATACCCTCCTTATCCTGG 21224
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCA--CCG--GCCTCAACATCGACGGTTATGGT 34948
||||| ||||| || |||| ||| ||| | |||||| || | || || ||
Sbjct 21223 ATCTTGGACTTGAC--AT--TATCAATTGTGTCCGAAGACTCAACCTCTAACGTAATTGT 21168
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || || | |||||| |||||||||||||||
Sbjct 21167 CTTGCCTGTCAAAGTCTTGACAAAGATCTGCATA 21134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324614810714472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |