Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10- 27] 4,749 sequences; 51,524,987 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq4538 123 1e-23 >seq4538 Length=19519 Score = 123 bits (136), Expect = 1e-23 Identities = 205/296 (69%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 ||||| || ||| ||||||||||||||||| | ||||| || | ||| | || | Sbjct 7303 TCAACACGCTTCATGAATAAATCTGGAATCCAAAGAGCATAGAAAAGATCACGGGCGCGG 7244 Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041 | ||||| |||||||| |||||| || || | ||| ||||| | ||| | ||||||| Sbjct 7243 ACCTCTTCCTTTCCGTGGTTCTTTCGGAGGTCAAGGAACTCAAAGACATCAGCGTGCCAT 7184 Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101 || || | ||||| |||||| ||| | || ||||| ||||| || ||||| Sbjct 7183 GGCTCAAGGTAGATGGCAAAAGCACCAGGACGCTTGTTACCACCCTGATCAACATATCTG 7124 Query 26102 GCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTA 26161 || || | ||||||||| | ||| ||||| | ||| | || ||||||||| | | Sbjct 7123 GCGGTGTTGTTGAAAACTCGAAGCATAGGAACAATTCCGTTGGAGTTTCCGTTTGTACCA 7064 Query 26162 TGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGC 26217 ||| | || ||| || | | || ||| ||| || |||||| |||||||| Sbjct 7063 GCAATGTAGGCTCCAGTGGCACGGATTCTGTGGACATTAAGACCGATACCACCAGC 7008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253025354440175