Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq4538 123 1e-23
>seq4538
Length=19519
Score = 123 bits (136), Expect = 1e-23
Identities = 205/296 (69%), Gaps = 0/296 (0%)
Strand=Plus/Minus
Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981
||||| || ||| ||||||||||||||||| | ||||| || | ||| | || |
Sbjct 7303 TCAACACGCTTCATGAATAAATCTGGAATCCAAAGAGCATAGAAAAGATCACGGGCGCGG 7244
Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041
| ||||| |||||||| |||||| || || | ||| ||||| | ||| | |||||||
Sbjct 7243 ACCTCTTCCTTTCCGTGGTTCTTTCGGAGGTCAAGGAACTCAAAGACATCAGCGTGCCAT 7184
Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101
|| || | ||||| |||||| ||| | || ||||| ||||| || |||||
Sbjct 7183 GGCTCAAGGTAGATGGCAAAAGCACCAGGACGCTTGTTACCACCCTGATCAACATATCTG 7124
Query 26102 GCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTA 26161
|| || | ||||||||| | ||| ||||| | ||| | || ||||||||| | |
Sbjct 7123 GCGGTGTTGTTGAAAACTCGAAGCATAGGAACAATTCCGTTGGAGTTTCCGTTTGTACCA 7064
Query 26162 TGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGC 26217
||| | || ||| || | | || ||| ||| || |||||| ||||||||
Sbjct 7063 GCAATGTAGGCTCCAGTGGCACGGATTCTGTGGACATTAAGACCGATACCACCAGC 7008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253025354440175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |