Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq4384 131 2e-25
>seq4384
Length=63329
Score = 131 bits (144), Expect = 2e-25
Identities = 186/257 (72%), Gaps = 6/257 (2%)
Strand=Plus/Minus
Query 138162 AATGGTGTGAGATGTT--TTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCAT 138219
||||||| ||||||| ||| |||||||| ||||| || || || |||||||| ||||
Sbjct 61569 AATGGTGCGAGATGTGACTTG--ACACCAATTGGACCAACACCTGGTCCTCCACCACCAT 61512
Query 138220 GTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATG 138279
| |||||||| ||||||||||| | || |||||||| ||||| |||||| |||| |
Sbjct 61511 GAGGAATACAAAATGTCTTATGAAGGTTGAGATGACAGACATCAGCACCAATCTCACCAG 61452
Query 138280 GTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCAT 138339
|| | || | ||| ||||| | || |||||||| | || ||||| |||||||
Sbjct 61451 GTGAGCACAATCCAATCTGAGCATTCATGTTCGCACCATCCATGTAAACCTGCCCACCAT 61392
Query 138340 TGTCATGAACGATCTTACATATCTGTC-TGATGTTTGTTTCAAATACACCATGAGTCGAT 138398
| |||||| | | ||| | | | ||| | || ||||| |||||| || ||
Sbjct 61391 GTTGATGAACCAAATCACA-GGCAGCCTTGACCTCTGGCTCAAAAACACCAAAGGTGGAA 61333
Query 138399 GGATATGTAATCATAAT 138415
|||||||| ||||| ||
Sbjct 61332 GGATATGTGATCATGAT 61316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578964029207480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |