Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq4538 284 1e-71
seq4003 102 1e-16
seq678 91.5 2e-13
>seq4538
Length=19519
Score = 284 bits (314), Expect = 1e-71
Identities = 1178/1826 (65%), Gaps = 57/1826 (3%)
Strand=Plus/Plus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204
||||| || |||| ||||| ||| || | ||||| | || |||||||||| |
Sbjct 6708 TACTTCGGATTCAAGACCCTCGAGC-GATCATATCTCCTCCGTCTCGATGGCAAGATTTG 6766
Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264
||| ||||| | ||| | ||||| || || | || || ||||| || | |||||
Sbjct 6767 CGAACGTCCACAACATATGATTATGCGTGTTGCTGTTGGTATTCACGGTGATAATATTGA 6826
Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCA 75322
||| | | ||||| ||| || ||||||| ||| || || | ||||| | |||
Sbjct 6827 GGCTGCCATTGAGACCTACAACTTGATGTCCAGCAAA-TACTTT-ACCCACGCCTCTCCA 6884
Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382
|| || || ||||||||| ||| | | || | || || ||||| |||| ||
Sbjct 6885 ACACTTTTTGCTGCTGGTACTCCACAAGCACAACTCTCATCATGTTTCCTCATCGACATG 6944
Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAA 75440
||||||||| || | ||||| |||| ||| | | | | | ||||| | || || |
Sbjct 6945 AAGGAGGACAGCATTGATGGTATTTATGACACTTTGAAG-ACT-TGCGCTATGATTTCTA 7002
Query 75441 AGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTC 75500
|| ||||| ||||| || | | |||| | | |||| | | | |||
Sbjct 7003 AGAACGCTGGTGGTATCGGTCTTAATGTCCACAGAATCCGTGCCACTGGAGCCTACATTG 7062
Query 75501 GGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAG 75560
|| ||||| || | || | || ||| |||| |||||||| || || ||| ||| |
Sbjct 7063 CTGGTACAAACGGAAACTCCAACGGAATTGTTCCTATGCTTCGAGTTTTCAACAACACCG 7122
Query 75561 CGCGCTATGTAAATCAAGCGGGGCGTCGCAAGGG-----GTCCATC-GCGGTCTACTTGG 75614
| | ||||| |||| ||| || |||| | || | | || ||||| | |
Sbjct 7123 CCAGATATGTTGATCA---GGGTGGTAACAAGCGTCCTGGTGCTTTTGCCATCTACCTTG 7179
Query 75615 AACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAG 75674
| |||||||| || ||| || | ||||||||||| | ||| ||||| || | ||||
Sbjct 7180 AGCCATGGCACGCTGATGTCTTTGAGTTCCTTGACCTCCGAAAGAACCACGGAAAGGAAG 7239
Query 75675 AGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGG 75734
||| || | ||||| || | | || ||||||||||| | ||||||||||| |
Sbjct 7240 AGGTCCGCGCCCGTGATCTTTTCTATGCTCTTTGGATTCCAGATTTATTCATGAAGCGTG 7299
Query 75735 TTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACG 75794
|||| || | | ||| | | | || || || || || ||| | | ||||
Sbjct 7300 TTGAAAAGAACCTTGACTGGACATTGATGTGCCCTAACGAGTGTCCTGGTTTGGCTGACG 7359
Query 75795 CGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATG 75854
||||| |||||||| || | || || || || | ||| | | | |
Sbjct 7360 TTTACGGTGATGAGTTTGAGGCTTTGTATGAGAAATACGAGGCTGAGAACATGGGCCGTA 7419
Query 75855 CGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913
|||||| | || | | | | ||||| | |||||||| || | ||||| ||||| |||
Sbjct 7420 AGACTGT-CAAGGCTCAAAAGCTTTGGTACTCTATTCTCGAAGCTCAGACCGAGACCGGA 7478
Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973
| || | ||||| ||||||||||| || ||| ||||| ||||| ||||| | ||
Sbjct 7479 AACCCTTTCATGCTCTACAAGGATGCCTGCAACCGAAAGAGCAACCAGAAGAACCTTGGT 7538
Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033
|| ||| ||||| || || |||||||| ||| | |||||| | |||||
Sbjct 7539 ACCATCCGAAGCTCCAACCTGTGCACGGAGATTGTTGAGTACTGTGCACCAGATGAAGTC 7598
Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACT 76093
|| |||||||||||||||||| | || ||||||| ||||| ||||| |||| ||||
Sbjct 7599 GCCGTTTGCAATTTGGCATCACTTGCTCTTCCAACATATGTTGATGAAAAGACCGCCACT 7658
Query 76094 TTTGATTATGAAAAACTTCATGAAATC-ACAAAGATTGTTACCAAAAATCTAAACCGAGT 76152
| ||| | | || ||||| || || | ||| ||||| ||| || | || |
Sbjct 7659 TATGACTTCCAGAAGCTTCACGAGGTCTGCCAAG-TTGTTGTCAAGAACTTGAATAAGAT 7717
Query 76153 CATTGACAGAAATTTTTATCCCGTT-GAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211
||||| | || | || || ||| ||| || ||||| ||| | || |||||||
Sbjct 7718 TATTGATATCAACTACTACCCAGTTCCAGA-AGCAAGAAAGAGCAATTTCCGTCACAGAC 7776
Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACG-----C 76266
| |||| | | |||||||||||||| || |||| ||| || | || || |
Sbjct 7777 CAATTGCTCTTGGTGTTCAAGGTCTTGCTGATG-----CTTTCTTGGCACTTCGCCTTCC 7831
Query 76267 ATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGC 76326
|| || || || || ||| | | || | || ||||| || || ||||||||
Sbjct 7832 TTTCGAGTCGCCAGAGGCTAAGCACCTCAACATCCAAATTTTTGAGACAATCTATCACGC 7891
Query 76327 ATCCCTGGAGGCGAGTTGT-GAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGG 76385
| | | || | || || |||| | |||| || | || ||||||| ||| |
Sbjct 7892 -TGCTTTGACTGCATCCGTCGAGCTGGCAAAGACCCATGGAACATACGAGACATATGAAG 7950
Query 76386 GTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGG--AAGGTGAAACCAAGC- 76442
| || || || ||| | || | |||||| | ||| ||||||| || || ||| | |
Sbjct 7951 GCTCACCTGCCTCCAAGGGCGAGCTTCAATATGACATGTGGGGCAA---GACACCTACCG 8007
Query 76443 TCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 76502
| | ||||||| | | ||| ||| ||| || | |||||||| ||||||
Sbjct 8008 ACCTTTGGGACTGGGCTAGCTTGAAGCAACAGATCGCCCAGCATGGTCTTCGCAACAGTT 8067
Query 76503 TTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGC 76561
| | | || || |||||||| ||| ||| |||| |||||||| || ||||||
Sbjct 8068 TGCTCGTTGCTCCTATGCCAACTGCCAGTACCAGTCAAATTCTTGGGT-TCAACGAATGC 8126
Query 76562 TTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATT 76621
|| || ||||| || | ||||||||| | | || || || ||||| ||
Sbjct 8127 TTCGAGCCATATACTTCCAACATCTACTCTCGTCGTGTTCTTGCTGGAGAGTTCCAAGTT 8186
Query 76622 GTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAG 76681
|||||| || | || ||||| | || || || ||||| | | ||||||
Sbjct 8187 GTCAACCCATGGCTTCTGAAGGACCTTGTTGATATGGGACTTTGGTCTGACAACATGAAG 8246
Query 76682 GATC---TCAT-GGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGA 76737
| | |||| | ||| ||||| || || |||||| | || | ||||||| |||
Sbjct 8247 AACCGAATCATCGCTGA----TGGTGGATCAATCCAAAATGTTCCAAACATCCCAGCTGA 8302
Query 76738 TATCAAGAATCTCTACCGCACAGTGTGGGAAA--TCAAGATGAAAGATGTCATTGACATG 76795
||||||| ||| ||| || || ||||| | ||| | | | | || | | |||
Sbjct 8303 TATCAAGGCTCTTTACAAGACTGTTTGGGAGATCTCACAACGTA--CTATCGTCCAGATG 8360
Query 76796 GCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGT 76855
|| || ||||||||| |||||||||||| |||| ||||| | |||| |
Sbjct 8361 GCTGCTGATCGTGGTGCATTCATTGATCAATCTCAATCAATGAACATCCACATGAAGGAC 8420
Query 76856 CCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACC 76915
||||| ||| ||| || | ||||||| | | ||||| ||| ||||| ||
Sbjct 8421 CCAACCATGGGTAAGATCACCAGTATGCATTTCGCAGGTTGGAAGTTGGGTCTCAAGACT 8480
Query 76916 GGAATGTACTATCTCCGATCAAAGGC 76941
|||||||||||||||||| | | |||
Sbjct 8481 GGAATGTACTATCTCCGAACCATGGC 8506
>seq4003
Length=28829
Score = 102 bits (112), Expect = 1e-16
Identities = 295/447 (66%), Gaps = 18/447 (4%)
Strand=Plus/Minus
Query 175243 TTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGCGCCCTT 175302
||||||||| ||||||| || || ||||||||||| || ||||| ||| ||
Sbjct 23291 TTTCTCAAGACACCCGAGCAATTCGAACGACTGGGTGCCAAGATTCCTCGAGGAGCCATT 23232
Query 175303 CTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCA 175362
|| | ||| || ||||| || || || | | || |||| || || ||||||
Sbjct 23231 CTTTCTGGTCCACCCGGTACTGGTAAAACTTTGTTAGCAAAGGCCACAGCTGGAGAATCA 23172
Query 175363 AATGTCCCATTCATCCAGTG-CTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGG 175421
|| || ||| || || | | || | | ||||| ||||||||||||||||||||
Sbjct 23171 GGCGTGCCTTTCTTC-AGCGTCAGTGGTTCTGAGTTTGTAGAGATGTTTGTTGGTGTGGG 23113
Query 175422 TGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTT 175481
||| || ||||| |||||||| | || | ||||| || |||||| ||||
Sbjct 23112 TGCTTCCAGAGTTCGGGATCTCTTCTCTCTGGCAAGGAAAAATACGCCTTGTATTATCTT 23053
Query 175482 CATTGATGAGATTGATGCGGTGGGCAA--------GCAACGCAGCGCTGGTGGTATGCCA 175533
||||||||| ||||| || | || || | || || | ||| | ||| |
Sbjct 23052 CATTGATGAAATTGACGCAATTGGAAAAGCTCGGGGAAAAGCCG-GCTCTTTCAATGGC- 22995
Query 175534 GCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGAC 175593
| |||||| || |||| || ||||||| | | |||||||||||||| || |
Sbjct 22994 GGAAATGATGAACGAGAGGCGACTCTTAATCAGATCTTGACCGAGATGGATGGTTT---C 22938
Query 175594 AATGAGACTG-GCA--TTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGAC 175650
||| | ||| ||| |||||||| |||| | || ||||| |||| | || || |
Sbjct 22937 AATACGTCTGAGCAGGTTGTGGTTCTTGCTGGTACCAATCGATCGGATGTTCTCGACCAG 22878
Query 175651 GCCCTCCTTCGCCCGGGTCGTTTTGAT 175677
||| | | || || |||||||||
Sbjct 22877 GCCTTGACAAGACCCGGACGTTTTGAT 22851
>seq678
Length=9679
Score = 91.5 bits (100), Expect = 2e-13
Identities = 287/442 (65%), Gaps = 2/442 (0%)
Strand=Plus/Plus
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128
|||| || | || ||| |||| ||||| ||| |||||||||||||| || || |
Sbjct 7975 CCTTTGCTCAACGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTTAGTGGCTCTT 8034
Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188
|| | || | ||||||||||||||| ||||| ||| | || || ||||| || |
Sbjct 8035 TCGCATCCATCTTTTGGTTGAAGAAGCGTGGTCTTATGGCTGGTCTTACTTTCTCCAACG 8094
Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTT 65248
| | || ||||| || |||||||||||| || ||||| |||||| |
Sbjct 8095 AGTTGATCTCCCGTGACGAGGGTCTCCACACCGATTTTGCATGCCTCCTCTTCTCCCATC 8154
Query 65249 TGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTG 65308
| | | || | | | || |||| || || | | ||||| ||||||||||
Sbjct 8155 TCAAGCACCGCCCAAGCAAGGCTGCTGTCCAAGCTGTCATCACTGAGGCTGTTGAGATTG 8214
Query 65309 AGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGA 65368
|| | | |||| | || || || || ||| |||| | ||||||||| ||| ||
Sbjct 8215 AGCAGGAGTTCTTGACTGAGGCTCTTCCTTGTGCTCTCCTTGGTATGAACGCTGGCTTGA 8274
Query 65369 TGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG-GGTGCCACCC 65427
|| | ||||| |||| || | ||||| || ||| | || || |
Sbjct 8275 TGAAGCAATACATCGAGTTCGTTGCTGATCGCCTTCTCCTTTCCCTCGGCAATGAGA-AG 8333
Query 65428 ATTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACC 65487
||| || | || ||||| ||||| ||||| ||||| |||| || ||||||
Sbjct 8334 GTTTACAAGGTTGCCAACCCATTCGACTTCATGGAGAACATCTCTCTTGCCGGAAAGACC 8393
Query 65488 AACTTCTTTGAGAAGCGAGTTG 65509
|||||||| |||||||| ||||
Sbjct 8394 AACTTCTTCGAGAAGCGTGTTG 8415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596534186137120
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