Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq167 360 3e-94
seq4295 187 3e-42
seq4739 161 1e-34
seq4538 145 1e-29
seq1393 136 5e-27
seq4373 123 3e-23
seq1669 113 6e-20
seq4003 111 2e-19
seq1114 109 7e-19
>seq167
Length=14118
Score = 360 bits (398), Expect = 3e-94
Identities = 496/691 (72%), Gaps = 7/691 (1%)
Strand=Plus/Minus
Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358
|| || ||||||||| | ||||| || ||||| ||||| ||| | | | |||||||
Sbjct 3020 GCCATAGGTATCGATCTTGGAACCACCTACTCCTGTGTGGGTATCTACCGTGATGATCGA 2961
Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418
| ||||||||| | || ||||| |||||||| || || || || | ||| ||||| |||
Sbjct 2960 ATTGAGATTATCGCCAACGACCAGGGAAACCGAACCACCCCTTCCTTCGTCGCCTTCACA 2901
Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478
|||| ||||||||| | |||||||||||||| || || || |||||||| |||
Sbjct 2900 GATACTGAACGTCTGATCGGAGATGCCGCAAAGAACCAAGTCGCCATGAACCCAGCCAAC 2841
Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538
|| ||||| ||||| |||||| | || || || ||||| | || || ||||||| | |
Sbjct 2840 ACAGTCTTCGACGCAAAGCGTTTGATCGGACGAAAGTTCGCAGACCAGGAAGTCCAGGCC 2781
Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTC--CCGGTGTGGCTGATAAGCCTATGATTA 195596
||||| ||| ||| ||| | | | || ||| |||| ||||| | |
Sbjct 2780 GATATGAAGCACTTTCCTT-TCACCGTCCTCGACCGAGGTGGA----AAGCCAGTCGTCG 2726
Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGT 195656
| |||| || | || |||||||||||||| | || ||||||||||| || ||| | |
Sbjct 2725 AAATTGAGTTCAAGGGCGAGAAGAAACAATTCACACCAGAAGAAATTTCTTCCATGATCT 2666
Query 195657 TGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTG 195716
|| | ||||||| |||||||| || ||| | | ||| ||| || || | || || |
Sbjct 2665 TGGTCAAGATGAGAGAGACTGCTGAGGCTTACCTTGGTGGAACCGTCAACAACGCCGTCG 2606
Query 195717 TGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTA 195776
| || || || || ||||| | ||||||||||| || || || ||||| || | | |
Sbjct 2605 TCACAGTCCCAGCCTACTTTACCGATTCACAACGTCAAGCTACCAAGGATGCCGGTTTAA 2546
Query 195777 TTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836
| || ||||| ||| |||| | || ||||| || || || || ||||| |||||||| |
Sbjct 2545 TCGCTGGTCTCAACGTTCTTCGTATCATCAACGAGCCTACCGCTGCTGCCATTGCTTACG 2486
Query 195837 GTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTA 195896
|||| |||||||| || | || | ||| || | ||||||||||| ||||| || |
Sbjct 2485 GTCTCGACAAGAAGGTTGAGGGTGAGAGAAACGTTCTCATCTTTGATCTTGGTGGAGGAA 2426
Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956
| || ||||| |||||| | | ||||| | ||||| || ||||| ||| | ||||| |
Sbjct 2425 CTTTCGATGTTTCACTTTTGACCATTGAGGAGGGTATCTTTGAAGTCAAGTCCACTGCCG 2366
Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
|||| ||||| | |||||||| || || ||
Sbjct 2365 GTGACACTCACTTGGGTGGTGAGGACTTTGA 2335
>seq4295
Length=64570
Score = 187 bits (206), Expect = 3e-42
Identities = 514/784 (66%), Gaps = 69/784 (9%)
Strand=Plus/Minus
Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769
||||| | ||||| || || ||||||| || || || || || || ||||| |||
Sbjct 61978 GCAGTCATCACTGTCCCAGCCTACTTCAACGACAACCAGCGTCAAGCTACCAAGGATGCT 61919
Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829
| ||| || || ||||| ||| ||| |||| ||||| || ||||| || ||||| ||
Sbjct 61918 GGTGCCATCGCCGGTCTTAACGTTCTCCGAATCATCAACGAGCCAACCGCCGCTGCTATC 61859
Query 195830 GCTTATGGTCTGGA--CAAGAA---CAAGGACGAAGATAAAAATGTATTGATCTTTGATC 195884
|| || ||||| | | ||| ||| || | || |||||| ||||| | |||||
Sbjct 61858 GCATACGGTCTTGGTGCCGGAAAGTCAA--ACAAGGAGCGAAATGTCTTGATTTATGATC 61801
Query 195885 TCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAA 195944
| ||||| || || || ||||| || || ||||| || | |||||| | ||| || |
Sbjct 61800 TTGGTGGAGGAACCTTCGATGTTTCTCTCCTCAACATCCAGGGTGGTGTTTTCACCGTCA 61741
Query 195945 AGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTT-CTCCGT 196003
||||||||||||||||||| || | || ||| ||||||||||| | | ||| ||| |
Sbjct 61740 AGGCTACTGCTGGTGATACCCACTTGGGAGGTCAAGATTTCGATAC-CAACTTGCTCGAT 61682
Query 196004 CATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAA---AG---ATATTTC---------- 196047
||||| | |||||| |||||| ||||| || | ||| |
Sbjct 61681 CATTTCAAGAAGGAGTTCACAAGAAAGACCAAGAAGTCAGTTTAAATTGCACCTTTTGCT 61622
Query 196048 ---TGG--------AA----ATCCTAGGGCTCTT------------CGT---------CG 196071
||| || | ||||| |||| ||| ||
Sbjct 61621 TCATGGCTATTACTAACTTTTTAATAGGGATCTTTCCGGCGATGCCCGTGCTCTTAGACG 61562
Query 196072 GCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG--GCTCAAACAATG 196129
||| | ||||| || || ||||| || ||||||| || | ||| || ||||| |
Sbjct 61561 TCTTCGTACTGCTTGCGAGCGTGCTAAGAGAACTCTTTC--CAACGGTGCCCAAACTACT 61504
Query 196130 GTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGT 196189
|||||||||||||| ||||| || || |||||| | | ||||| ||||| |||
Sbjct 61503 GTTGAGATTGATTCCTTGTTCGATGGTGAGGACTTCAACGCTCAAATTACTCGTGCTCGT 61444
Query 196190 TTTGAAGAGTTAAACTCTGATTTGTTTA--GGAAGTGTATGGAACCTGTTGAACAAGTAC 196247
|| || || || ||||| | || | || | | |||| ||||| | ||| ||
Sbjct 61443 TTCGAGGACTTGAACTCAAAGGCCTTCAATGGTA--CTTTGGACCCTGTCGCACAGGTGT 61386
Query 196248 TTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAA 196307
| || || || || || ||| ||||| || |||||||| ||||| || ||||| |
Sbjct 61385 TGAAGGATGCCAACATTGACAAGAGCAAGGTCGACGAAATTGTGCTTGTTGGTGGATCCA 61326
Query 196308 CCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACA 196367
|||||||||| | ||| ||| || | || | |||||| || || | | | |
Sbjct 61325 CCCGTATTCCTAGGATACAAAAGCTCCTCAGTGACTTCTTTGATGGCAAGAAGCTCGAGA 61266
Query 196368 AAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCT 196427
| | |||||||| ||||| || ||||| |||||||| ||||| || |||| ||| | |
Sbjct 61265 AGAGCATCAACCCTGATGAGGCTGTTGCATATGGTGCCGCCGTCCAAGCTGGTATCTTGT 61206
Query 196428 CAGG 196431
||||
Sbjct 61205 CAGG 61202
>seq4739
Length=56954
Score = 161 bits (178), Expect = 1e-34
Identities = 158/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
||||| || ||||| || ||||| || ||||| || || || ||||| ||| |||| ||
Sbjct 20420 ACTGGTAAGACTATTACTCTCGAAGTAGAGTCTTCTGATACCATCGACAACGTCAAGTCC 20479
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
||||| || || |||||||||||||| || || || ||||| | || || || || ||
Sbjct 20480 AAGATCCAGGACAAGGAAGGCATTCCTCCAGACCAACAACGCTTGATCTTCGCCGGCAAG 20539
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
||||| || || || |||||||| | ||||||||| |||| |||||||||||||| |||
Sbjct 20540 CAGCTCGAGGACGGTCGTACCCTTTCCGATTACAACATTCAGAAGGAGTCTACTCTCCAC 20599
Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089
| || || | ||||| ||||||
Sbjct 20600 TTGGTCCTCCGTCTTCGTGGTGGT 20623
Score = 161 bits (178), Expect = 1e-34
Identities = 158/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
||||| || || || || |||||||| || || || ||||| || || ||| | || |
Sbjct 20703 ACTGGCAAGACCATTACTCTCGAGGTCGAATCATCCGACACCATTGACAACGTTAAGTCG 20762
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
|||||||| |||||||| || |||||||| || || ||||| ||||| || |||||||||
Sbjct 20763 AAGATTCAGGATAAGGAGGGTATTCCACCGGACCAACAACGTCTTATCTTCGCTGGTAAA 20822
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
|| ||||| || ||||| || ||| | || |||||| | |||||||| || || || |||
Sbjct 20823 CAACTTGAGGACGGACGAACTCTCTCGGACTACAACATCCAAAAGGAATCCACACTCCAC 20882
Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089
| ||||| || || || ||||||
Sbjct 20883 TTGGTTCTCAGACTCCGTGGTGGT 20906
Score = 159 bits (176), Expect = 5e-34
Identities = 175/233 (75%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| ||||| || || ||| | |||||||| || ||||| | || ||||| |
Sbjct 20902 GTGGTATGCAGATCTTCGTTAAGACCTTGACTGGAAAGACAATCACTTTGGAAGTTGAAT 20961
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| || || || ||||| || | || ||||||| ||||| ||||| || || ||||| |
Sbjct 20962 CCTCCGATACTATCGACAATGTGAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCTG 21021
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
|||| || ||||| ||||| || || || || ||||| ||||| || ||| | | || |
Sbjct 21022 ATCAACAGCGACTCATTTTCGCAGGCAAGCAACTTGAGGATGGCCGAACCTTGTCCGACT 21081
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| | ||||||||||| ||||| || | || || | ||||| ||||||
Sbjct 21082 ACAACATCCAAAAGGAGTCCACTCTTCATTTGGTACTTCGTCTTCGTGGTGGT 21134
Score = 152 bits (168), Expect = 7e-32
Identities = 152/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| |||||||| || || | || || || || || || | ||||||||||
Sbjct 21130 GTGGTATGCAGATCTTTGTCAAGACTTTGACAGGCAAGACAATTACGTTAGAGGTTGAGT 21189
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| || |||||||| ||||| |||| ||||||| || |||||||| || |||||||| |
Sbjct 21190 CTTCGGACACAATTGATAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATTCCACCAG 21249
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| || || ||| | ||||| |||||||| || | || ||||| |||||||| || |
Sbjct 21250 ACCAACAGCGATTGATTTTCGCTGGTAAGCAATTGGAGGATGGTCGTACCCTTAGCGACT 21309
Query 172037 ACAACGTTCAAAAGGAG 172053
||||| |||||||||||
Sbjct 21310 ACAACATTCAAAAGGAG 21326
>seq4538
Length=19519
Score = 145 bits (160), Expect = 1e-29
Identities = 516/798 (65%), Gaps = 15/798 (2%)
Strand=Plus/Plus
Query 77966 ATGCGTGTTTCTATTGGTATTCATGGAAATGATATTCCAGCGGTACTTGAAACGTATGAT 78025
||||||||| || |||||||||| || || ||||| || | |||| || || |
Sbjct 6789 ATGCGTGTTGCTGTTGGTATTCACGGTGATAATATTGAGGCTGCCATTGAGACCTACAAC 6848
Query 78026 AAAATGTCCAATGGTATGTTTATTCACGCAACACCTACTTTGTTTAATGCAGGTACTCCC 78085
||||||| |||| ||||| | || || | ||| ||| ||||||||
Sbjct 6849 TTGATGTCCAGCAAATACTTTACCCACGCCTCTCCAACACTTTTTGCTGCTGGTACTCCA 6908
Query 78086 CGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAGGACTCTATTAATGGTATA 78145
| |||| | ||||| |||||||| | | | ||||||||| ||| |||||||
Sbjct 6909 CAAGCACAACTCTCATCATGTTTCCTCATCGACATGAAGGAGGACAGCATTGATGGTATT 6968
Query 78146 TACGGGACTCTCACAGAGT-GTGCTCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCA 78204
|| | ||| | | ||| | | ||| |||||||||| ||||||||||| |||||| |
Sbjct 6969 TATGACACTTTGA-AGACTTGCGCTATGATTTCTAAGAACGCTGGTGGTATCGGTCTTAA 7027
Query 78205 TATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAACTAATGGTCAGTCTGATGG 78264
| | ||| | ||||| | || ||| || || || || | || | ||
Sbjct 7028 TGTCCACAGAATCCGTGCCACTGGAGCCTACATTGCTGGTACAAACGGAAACTCCAACGG 7087
Query 78265 AATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCG 78324
|||| ||||||||||| | || ||||| || || | ||||| | || |||| |
Sbjct 7088 AATTGTTCCTATGCTTCGAGTTTTCAACAACACCGCCAGATATGTTGATCA---GGGTGG 7144
Query 78325 TAGGAAG------GGGTCATTCGCTATGTACCTTGAACCTTGGCACGCCGATGTAATGGA 78378
|| ||| || | || || || |||||||| || |||||||| ||||| | ||
Sbjct 7145 TAACAAGCGTCCTGGTGCTTTTGCCATCTACCTTGAGCCATGGCACGCTGATGTCTTTGA 7204
Query 78379 TTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCGATGCAGGGATTTATTCAC 78438
|| | || || || ||||| || | || || | || | | ||| | |||
Sbjct 7205 GTTCCTTGACCTCCGAAAGAACCACGGAAAGGAAGAGGTCCGCGCCCGTGATCTTTTCTA 7264
Query 78439 TGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGAAGGA-GGTAAATGGTCTC 78497
|||| | |||||||| ||| | || |||||| | ||||| ||| | | | ||| |
Sbjct 7265 TGCTCTTTGGATTCCAGATTTATTCATGAAGCGTGTTGA-AAAGAACCTTGACTGGACAT 7323
Query 78498 TTTTCTGTCCAGATAAGACTAAGGGTCTTTCAGATGTATACGGGGAAGAATTCGAAAAAT 78557
| | || || | || | ||| | | || || ||||| || || || || |
Sbjct 7324 TGATGTGCCCTAACGAGTGTCCTGGTTTGGCTGACGTTTACGGTGATGAGTTTGAGGCTT 7383
Query 78558 TGTACACTAAATACGAAGAGGAAGGTCTCGCTATTAAGACAATTGATGCATCTGAA-CTA 78616
|||| |||||||| | || | | |||||| | | || || || ||
Sbjct 7384 TGTATGAGAAATACGAGGCTGAGAACATGGGCCGTAAGACTGTCAAGGC-TCAAAAGCTT 7442
Query 78617 TGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCGTATATGCTATACAAAGAC 78676
||| | ||||| || || ||| || |||||||| | ||| | ||||| ||||| ||
Sbjct 7443 TGGTACTCTATTCTCGAAGCTCAGACCGAGACCGGAAACCCTTTCATGCTCTACAAGGAT 7502
Query 78677 AGCTGTAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCATCAAAAGCTCTAACCTTTGC 78736
||| ||| ||||| ||||| |||||||| ||| |||| |||||| ||||| |||
Sbjct 7503 GCCTGCAACCGAAAGAGCAACCAGAAGAACCTTGGTACCATCCGAAGCTCCAACCTGTGC 7562
Query 78737 ACAGAAATTCTGGAATAC 78754
|| || ||| | || |||
Sbjct 7563 ACGGAGATTGTTGAGTAC 7580
>seq1393
Length=42225
Score = 136 bits (150), Expect = 5e-27
Identities = 205/288 (71%), Gaps = 9/288 (3%)
Strand=Plus/Minus
Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769
|||||||| ||||| || || ||||||| || || |||| || || ||||| |||
Sbjct 6103 GCAGTTGTTACTGTTCCAGCCTACTTCAACGACAACCAGAGACAAGCAACCAAGGATGCT 6044
Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829
| | ||||| ||| | ||| || | || |||| ||||| || || || || ||
Sbjct 6043 GGTATCATTGCTGGTTTGAACGTCCTCCGTATCGTCAACGAACCTACCGCCGCAGCTATC 5984
Query 195830 GCTTATGGTCTGGACAAGAA---CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTC 195886
|| || ||||| |||||| ||| || || | |||| |||| ||| ||||||
Sbjct 5983 GCATACGGTCTTGACAAGGTTGGCAAAGA----GAGACAAATC-ATTG-TCTACGATCTC 5930
Query 195887 GGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAG 195946
||||| || || || ||||| || |||||| |||||||| |||| | || || ||
Sbjct 5929 GGTGGAGGAACCTTCGATGTGTCCCTTCTCTCTATTGAAGATGGTGTTTTTGAGGTTCTT 5870
Query 195947 GCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGT 195994
|||| |||||||| |||||| | |||||||| ||||||||| ||||
Sbjct 5869 TCTACCGCTGGTGACACTCATTTGGGTGGTGAGGATTTCGATCAACGT 5822
Score = 98.7 bits (108), Expect = 1e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357
|| ||| ||||||||||||||||| || ||||| ||||| ||||| ||| ||||
Sbjct 6575 AGTTATCGGTATCGATTTAGGAACCACCTACTCTTGTGTGGGTGTGATGCAGAATGGAAA 6516
Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417
|| || || | ||| ||||| ||| || | | || ||||| || || || |||||
Sbjct 6515 GGTCGAAATCCTGGTGAACGACCAGGGACACAGAATTACCCCATCATATGTCGCATTTAC 6456
Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477
|| | ||| | || |||||||| |||||||| || ||| | ||| ||||| | ||
Sbjct 6455 CGACGAGGAAAGACTAGTTGGAGACGCCGCAAAGAACCAGGCCGCTGGAAACCCAAAGAA 6396
Query 195478 TACTGTCTTTGA 195489
|| |||||||
Sbjct 6395 CACCATCTTTGA 6384
>seq4373
Length=63444
Score = 123 bits (136), Expect = 3e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 171904 CTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAA 171963
|| ||||||||||| || ||||||||||| || ||||| ||||||| || || |||||
Sbjct 31616 CTAGAGGTTGAGTCTTCTGACACAATCGACAATGTCAAATCCAAGATCCAGGACAAGGAG 31557
Query 171964 GGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGT 172023
|| || ||||| || || || || | || || || || || || || ||||| || |||
Sbjct 31556 GGAATCCCACCAGACCAACAGCGCTTGATCTTCGCCGGAAAGCAACTCGAAGACGGCCGT 31497
Query 172024 ACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGG 172083
|||||| || |||||| | ||||||||||| || || || || || || | || ||
Sbjct 31496 ACCCTCAGCGACTACAACATCCAAAAGGAGTCGACCCTCCATCTCGTGCTCCGTCTCCGT 31437
Query 172084 GGTGGTGC 172091
|| || ||
Sbjct 31436 GGAGGAGC 31429
>seq1669
Length=79912
Score = 113 bits (124), Expect = 6e-20
Identities = 112/145 (77%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 171907 GAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGC 171966
||||||||||| || ||||||||||| || |||| ||||||| || || ||||| ||
Sbjct 7586 GAGGTTGAGTCTTCGGACACAATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGA 7527
Query 171967 ATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACC 172026
|| ||||| || || ||||| || || || || || ||||| || ||||| || || |||
Sbjct 7526 ATCCCACCGGACCAACAACGTCTAATCTTCGCCGGAAAACAACTCGAAGACGGCCGAACC 7467
Query 172027 CTCGCTGATTACAACGTTCAAAAGG 172051
||| || |||||| | |||||||
Sbjct 7466 CTCAGCGACTACAACATCCAAAAGG 7442
>seq4003
Length=28829
Score = 111 bits (122), Expect = 2e-19
Identities = 305/458 (67%), Gaps = 22/458 (5%)
Strand=Plus/Minus
Query 198450 TTCAAGGATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGTTGATTTT 198509
||||||||||| | |||||| ||| ||| ||| ||| | ||| | || |||
Sbjct 23348 TTCAAGGATGTCGCGGGTATGGACGAAGCCAAGTTGGAGATTATGGAATTCGTCTCATTT 23289
Query 198510 CTTAAAAACCCCGAAAAGTACTATGGAAGTGGTGCCCGAATCCCACGTGGTGCTCTTCTC 198569
|| || | ||||| | | | | || |||||| || || || || || ||||
Sbjct 23288 CTCAAGACACCCGAGCAATTCGAACGACTGGGTGCCAAGATTCCTCGAGGAGCCATTCTT 23229
Query 198570 GCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGT 198629
| ||| | || |||||||||||||| | |||| || | || || ||||| |
Sbjct 23228 TCTGGTCCACCCGGTACTGGTAAAACTTTGTTAGCAAAGGCCACAGCTGGAGAATCAGGC 23169
Query 198630 GTCCCCTTTCTTCAGTGCTCCGCGGC---GAGTTTCATCGAGATGTTCGTTGGTGTTGGT 198686
|| || ||||||||| | || | || |||||| | |||||||| |||||||| |||
Sbjct 23168 GTGCC-TTTCTTCAGCG-TCAGTGGTTCTGAGTTTG-TAGAGATGTTTGTTGGTGTGGGT 23112
Query 198687 GCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCTTC 198746
||| | || ||||| ||||| | ||| | ||||| || ||||| ||||||
Sbjct 23111 GCTTCCAGAGTTCGGGATCTCTTCTCTCTGGCAAGGAAAAATACGCCTTGTATTATCTTC 23052
Query 198747 ATTGATGAGATTGACGCTGTTGGTAAGAAGCGTGGTGGAA------CTACTACA--CCTG 198798
|||||||| |||||||| |||| | |||| || | || || | || |
Sbjct 23051 ATTGATGAAATTGACGCAATTGG--AAAAGCTCGGGGAAAAGCCGGCTCTTTCAATGGCG 22994
Query 198799 GTAATGATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGACA 198858
| |||||||| || ||| ||| |||| ||| | | || |||||||||||||| ||
Sbjct 22993 GAAATGATGAACGAGAGGCGACTCTTAATCAGATCTTGACCGAGATGGATGGTTT---CA 22937
Query 198859 ATGAGACTG-GTA--TCGTGGTGATTGCTGCTACAAAT 198893
|| | ||| | | | ||||| |||||| ||| |||
Sbjct 22936 ATACGTCTGAGCAGGTTGTGGTTCTTGCTGGTACCAAT 22899
>seq1114
Length=145283
Score = 109 bits (120), Expect = 7e-19
Identities = 235/350 (67%), Gaps = 10/350 (3%)
Strand=Plus/Plus
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
|||||||||||||| || || || | | | || | || || |||| ||||| ||
Sbjct 47510 AAGATGAAGGAGACCGCTGAGTCCTACCTCACAAAGCCAGTCCAAAATGCTGTTGTTACA 47569
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| || || ||||||| ||||| ||||| || || || ||||| |||| | || ||
Sbjct 47570 GTTCCAGCGTACTTCAACGATTCCCAACGTCAAGCCACCAAGGATGCTGGTCAAATCGCT 47629
Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841
||||| || ||| ||| | | || || ||||| || ||||| |||| || |||||
Sbjct 47630 GGTCTTAATGTTCTGAGAGTGGTTAACGAGCCAACCGCAGCTGCCCTTGCGTACGGTCTT 47689
Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTG--ATCTTTGATCTCGGTGGTGGTACGT 195899
|| ||| | ||||| ||||| ||||| ||| || | ||||| || || |
Sbjct 47690 GAGAAGGATGAGGAC-AAGAT-------TATTGCAGTCTACGACTTGGGTGGAGGAACCT 47741
Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959
||||| |||| |||| | ||| || ||| | || || || ||| | || || |
Sbjct 47742 TTGATATCTCCGTTCTGGAGATTCAAAAGGGTGTTTTTGAGGTCAAGTCCACCAACGGAG 47801
Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTG 196009
||||||| | || || || || || ||| | || ||||||| |||
Sbjct 47802 ATACTCACTTGGGAGGAGAGGACTTTGATATTCACCTAGTCCGTCACTTG 47851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657823347643280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |