Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10- 27] 4,749 sequences; 51,524,987 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq4739 86.0 1e-11 >seq4739 Length=56954 Score = 86.0 bits (94), Expect = 1e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || || || || | || |||| |||| || | |||||||||||| || || | | Sbjct 20860 ATGTTGTAGTCCGAGAGAGTTCGTCCGTCCTCAAGTTGTTTACCAGCGAAGATAAGACGT 20801 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 |||||||| ||||| || || || ||||| || || || || || || || || Sbjct 20800 TGTTGGTCCGGTGGAATACCCTCCTTATCCTGAATCTTCGACTTAACGTTGTCAATGGTG 20741 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054 || || ||||| || || ||||||||||| || ||||| || || || Sbjct 20740 TCGGATGATTCGACCTCGAGAGTAATGGTCTTGCCAGTCAAAGTCTT 20694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905082268864200