Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq4739 86.0 1e-11
>seq4739
Length=56954
Score = 86.0 bits (94), Expect = 1e-11
Identities = 119/167 (71%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
|| || || || || | || |||| |||| || | |||||||||||| || || | |
Sbjct 20860 ATGTTGTAGTCCGAGAGAGTTCGTCCGTCCTCAAGTTGTTTACCAGCGAAGATAAGACGT 20801
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|||||||| ||||| || || || ||||| || || || || || || || ||
Sbjct 20800 TGTTGGTCCGGTGGAATACCCTCCTTATCCTGAATCTTCGACTTAACGTTGTCAATGGTG 20741
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054
|| || ||||| || || ||||||||||| || ||||| || || ||
Sbjct 20740 TCGGATGATTCGACCTCGAGAGTAATGGTCTTGCCAGTCAAAGTCTT 20694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905082268864200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |