Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10- 27] 4,749 sequences; 51,524,987 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1404 125 1e-22 >seq1404 Length=42043 Score = 125 bits (138), Expect = 1e-22 Identities = 90/104 (87%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 2035652 CAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTAT 2035711 ||||||||||||||||||||||||| | ||| | || |||||||| || |||||| | || Sbjct 40928 CAACTACCTCGACATCAAGCCCCTCTTGGATGTTGGTTGCAAGACAGTTGCCAACATGAT 40987 Query 2035712 CAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 ||||||||||||||| ||||| ||||| ||||| || ||||||| Sbjct 40988 CAAGGGCAAGTCGCCAGAGGAGATCCGAAAGACTTTCAACATCA 41031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915741227209811