Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_023423.1
Length=610033
Score E
Sequences producing significant alignments: (Bits) Value
seq1536 86.0 2e-11
>seq1536
Length=41104
Score = 86.0 bits (94), Expect = 2e-11
Identities = 121/165 (73%), Gaps = 9/165 (5%)
Strand=Plus/Minus
Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743
||| ||||| | ||| || ||||||||||| |||||||| | || ||||||| || |||
Sbjct 10881 CTCGATCAAATGGGCAATGGTCATACGAGATGGAATGGCGTGGGGATTGATGATAAGGTC 10822
Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTC--TTCAGGTACA-ATCAAACC 309800
||| || || || || |||||||||| ||||| ||| || | | | |||
Sbjct 10821 CGGTACGATGCC-CTGGCAGG--TGAAAGGCATGTCTTCCATTC---TATATGTGATACC 10768
Query 309801 AATAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845
||| || ||||| || |||| | ||||| ||||||||||||||
Sbjct 10767 AATGGTACCCTTCTGTCCGTGACGAGAAGCGAACTTGTCACCAAT 10723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1951855629067672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |