Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10- 27] 4,749 sequences; 51,524,987 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq4739 86.0 6e-12 >seq4739 Length=56954 Score = 86.0 bits (94), Expect = 6e-12 Identities = 94/123 (76%), Gaps = 4/123 (3%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||||||| | || |||| ||||||||||||||||| Sbjct 20592 GTAGACTCCTTCTGAATGTTGTAATCGGAAAGGGT--ACGACCGTCCTCGAGCTGCTTGC 20535 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | || || ||||| ||||| |||||||||||||| |||||| || Sbjct 20534 CGGCGAAGATCAAGCGTTGTTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGACT 20475 Query 133582 TGA 133584 ||| Sbjct 20474 TGA 20472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483392102932760