Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10- 27] 4,749 sequences; 51,524,987 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq4739 84.2 5e-11 >seq4739 Length=56954 Score = 84.2 bits (92), Expect = 5e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || ||||| || |||||||||||||| ||| || || || |||| || ||| Sbjct 20931 ACTGGAAAGACAATCACTTTGGAAGTTGAATCCTCCGATACTATCGACAATGTGAAGTCC 20990 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || || || || || || || |||| || ||||| || ||| Sbjct 20991 AAGATCCAAGACAAGGAGGGTATCCCACCTGATCAACAGCGACTCATTTTCGCAGGCAAG 21050 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 || | || ||||| | || ||| |||| |||||| |||| || ||||| |||||||| Sbjct 21051 CAACTTGAGGATGGCCGAACCTTGTCCGACTACAACATCCAAAAGGAGTCCACTCTTCA 21109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181748890266829