Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq678 127 3e-23
>seq678
Length=9679
Score = 127 bits (140), Expect = 3e-23
Identities = 222/320 (69%), Gaps = 5/320 (2%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || ||||| ||||| || || ||||| || |||||| | || |
Sbjct 7526 GATCTGGCAAATGTAC-AAGAAGGCTGAGGCTTCGTTCTGGACTGCTGAGGAGATTGATC 7584
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891
| | || | ||||| ||| | ||| |||||||| | ||||||
Sbjct 7585 TATCCAAGGATCTCAACGACTGGAACAACAAGCTCAACGATGACGAGCGTTACTTCATCT 7644
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
|||||||||| |||| || || ||| || || ||||| ||||||||| |
Sbjct 7645 CCCACGTCCTCG-CTTTCTTTGCTGCCTCTGACGGAATCGTCAACGAGAACCTACTTGAA 7703
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| | || || || ||| | || ||||| || || || || || |||||||||
Sbjct 7704 CGCTTCAGCAATGAAGTTCAAGTTCCTGAGGCCCGATTCTTCTATGGTTTCCAGATCATG 7763
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
|| || ||||| |||||||| |||||||| ||||| || || |||||| ||| ||| | |
Sbjct 7764 ATGGAGAACATTCACTCTGAGACCTACTCCCTCCTTATTGATACCTACATCATGGAACAG 7823
Query 1456072 GTCGAGAAGGACCACCTCTT 1456091
| | ||| | |||||||
Sbjct 7824 GCACAAAAGACCTACCTCTT 7843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177353150221338
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |