Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq4739 114 9e-21
>seq4739
Length=56954
Score = 114 bits (126), Expect = 9e-21
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| |||||||| ||| | || ||||| || |||||| | |||||||| ||| |
Sbjct 20907 ATGCAGATCTTCGTTAAGACCTTGACTGGAAAGACAATCACTTTGGAAGTTGAATCCTCC 20966
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| ||| | || ||| | || | || | | ||||| || ||| | || || |||||
Sbjct 20967 GATACTATCGACAATGTGAAGTCCAAGA-TCCAAGACAAGGAGGGTATCCCACCTGATCA 21025
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || || || ||||| ||||| || || | || || || ||| |||||
Sbjct 21026 ACAGCGACTCATTTTCGCAGGCAAGCAACTTGAGGATGGCCGAACCTTGTCCGACTACAA 21085
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819
||| ||||| |||||||| | ||||| ||
Sbjct 21086 CATCCAAAAGGAGTCCACTCTTCATTTGGT 21115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337990036532492
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |