Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fraxineus_20[genbank_20GCA_5F001414365.1_202015-10-
27] 4,749 sequences; 51,524,987 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq678 104 2e-17
>seq678
Length=9679
Score = 104 bits (114), Expect = 2e-17
Identities = 172/248 (69%), Gaps = 3/248 (1%)
Strand=Plus/Minus
Query 4848 TCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACT 4907
||||| || || || || || ||||| || || || ||| ||| || || | |||
Sbjct 7783 TCAGAGTGAATGTTCTCCATCATGATCTGGAAACCATAGAAGAATCGGGCCTCAGGAACT 7724
Query 4908 TGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCA 4967
|||||||| || | || | ||| | || ||| ||||| || || |||||| ||| |||
Sbjct 7723 TGAACTTCATTGCTGAAGCGTTCAAGTAGGTTCTCGTTGACGATTCCGTCAGAGGCAGCA 7664
Query 4968 AAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAG---TTTTTTCCAG 5024
|| || || | || || || || ||||| | |||||| || || || ||||||
Sbjct 7663 AAGAAAGCGAGGACGTGGGAGATGAAGTAACGCTCGTCATCGTTGAGCTTGTTGTTCCAG 7604
Query 5025 TGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTT 5084
| | | ||| || | || ||||| || ||| ||||||| ||||| || || || ||
Sbjct 7603 TCGTTGAGATCCTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAAGCCTCAGCCTTC 7544
Query 5085 TTGTACAT 5092
||||||||
Sbjct 7543 TTGTACAT 7536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427024883036417
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |