Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015- 10-27] 504 sequences; 61,124,938 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq476 84.2 2e-11 >seq476 Length=308794 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 17228 TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCT 17287 || || ||||| ||||||||||| ||| ||| | |||||||| ||||||||||| Sbjct 12692 TCCATGATATAGGTATCGATGAGGAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATG 12751 Query 17288 ATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCC 17347 || || || ||||| ||| ||||||| || | ||||| ||||| | ||| || || Sbjct 12752 ATTTGGAAACCGTAGAAGAATCGGGCCTCTGGGATTTGGACTTCACTGCTGAAGCGCTCG 12811 Query 17348 GCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 || || ||||| || || ||||| || ||||| || || Sbjct 12812 AGGAGGTTCTCGTTAACAATTCCGTCAGAGGCAGCGAAGAAAGC 12855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517542339462720